Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC009313.2-201ENST00000417893 1941 ntBASIC4.76□□□□□ -1.65
PTPN6P29350 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
PTPN6P29350 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTPN6P29350 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTPN6P29350 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTPN6P29350 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTPN6P29350 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTPN6P29350 RNA5SP507-201ENST00000363603 121 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.75□□□□□ -1.65
PTPN6P29350 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTPN6P29350 RNU1-106P-201ENST00000384382 164 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 MIR600-201ENST00000385007 98 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 MIR765-201ENST00000390226 114 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PTPN6P29350 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PTPN6P29350 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.75□□□□□ -1.65
PTPN6P29350 RPL6P29-201ENST00000414863 865 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 RPL23AP27-201ENST00000415161 451 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.75□□□□□ -1.65
PTPN6P29350 QRSL1P2-201ENST00000418582 964 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 RNF19BPX-201ENST00000426224 625 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.75□□□□□ -1.65
PTPN6P29350 RPL34P6-201ENST00000432390 345 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 PTMAP6-201ENST00000439110 327 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
PTPN6P29350 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.75□□□□□ -1.65
PTPN6P29350 EIF4A1P11-201ENST00000451239 222 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 RPS4XP12-201ENST00000461747 709 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 RN7SL443P-201ENST00000464331 290 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.75□□□□□ -1.65
PTPN6P29350 BX284632.1-201ENST00000478218 541 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 RPL21P6-201ENST00000479171 504 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 PCNAP1-201ENST00000505363 709 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTPN6P29350 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTPN6P29350 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.75□□□□□ -1.65
PTPN6P29350 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.75□□□□□ -1.65
PTPN6P29350 AC067904.2-201ENST00000517322 1283 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.75□□□□□ -1.65
PTPN6P29350 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
PTPN6P29350 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.75□□□□□ -1.65
PTPN6P29350 BNIP3P1-201ENST00000547295 580 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.75□□□□□ -1.65
PTPN6P29350 HMGN2P6-201ENST00000551091 273 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 AC067805.1-201ENST00000559344 470 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 AC092868.3-201ENST00000560515 784 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 MIR3691-201ENST00000578066 90 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.75□□□□□ -1.65
PTPN6P29350 AC006116.3-201ENST00000592968 361 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 AL133406.3-201ENST00000606817 541 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 AC084036.1-201ENST00000609190 508 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 AC099494.2-201ENST00000623371 978 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
PTPN6P29350 AC119674.1-220ENST00000641502 1048 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTPN6P29350 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
PTPN6P29350 AC053481.2-202ENST00000582394 1500 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.75□□□□□ -1.65
PTPN6P29350 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTPN6P29350 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.75□□□□□ -1.65
PTPN6P29350 AC021242.1-201ENST00000507315 2035 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTPN6P29350 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTPN6P29350 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.75□□□□□ -1.65
PTPN6P29350 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTPN6P29350 MUC2-202ENST00000613187 4845 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.75□□□□□ -1.65
PTPN6P29350 AC015813.6-201ENST00000624409 5808 ntBASIC4.75□□□□□ -1.65
PTPN6P29350 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PTPN6P29350 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PTPN6P29350 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PTPN6P29350 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PTPN6P29350 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.74□□□□□ -1.65
PTPN6P29350 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PTPN6P29350 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.74□□□□□ -1.65
PTPN6P29350 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PTPN6P29350 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
PTPN6P29350 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
PTPN6P29350 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PTPN6P29350 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
PTPN6P29350 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PTPN6P29350 RN7SKP113-201ENST00000363891 295 ntBASIC4.74□□□□□ -1.65
PTPN6P29350 RNU6-152P-201ENST00000384037 107 ntBASIC4.74□□□□□ -1.65
PTPN6P29350 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PTPN6P29350 MIR937-201ENST00000401271 86 ntBASIC4.74□□□□□ -1.65
PTPN6P29350 AL359643.1-201ENST00000404109 423 ntBASIC4.74□□□□□ -1.65
PTPN6P29350 RN7SKP213-201ENST00000410746 298 ntBASIC4.74□□□□□ -1.65
PTPN6P29350 RPS20P25-201ENST00000412447 352 ntBASIC4.74□□□□□ -1.65
PTPN6P29350 AL356806.1-201ENST00000422524 916 ntBASIC4.74□□□□□ -1.65
PTPN6P29350 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.74□□□□□ -1.65
PTPN6P29350 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.74□□□□□ -1.65
PTPN6P29350 MTCO1P57-201ENST00000432182 261 ntBASIC4.74□□□□□ -1.65
PTPN6P29350 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.74□□□□□ -1.65
PTPN6P29350 PA2G4P6-201ENST00000438325 1197 ntBASIC4.74□□□□□ -1.65
PTPN6P29350 PTMAP3-201ENST00000447474 330 ntBASIC4.74□□□□□ -1.65
PTPN6P29350 MORF4L1P4-201ENST00000450245 976 ntBASIC4.74□□□□□ -1.65
PTPN6P29350 SBDSP1-204ENST00000453858 737 ntBASIC4.74□□□□□ -1.65
PTPN6P29350 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PTPN6P29350 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.74□□□□□ -1.65
PTPN6P29350 EIF2S2P4-201ENST00000461070 984 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms