Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.44□□□□□ -1.38
SNRPA1P09661 KCTD9P6-201ENST00000522306 950 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 AC012339.2-201ENST00000523996 453 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 AP003066.2-201ENST00000529375 555 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 NPM1P35-201ENST00000533043 868 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.44□□□□□ -1.38
SNRPA1P09661 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SNRPA1P09661 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.44□□□□□ -1.38
SNRPA1P09661 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.44□□□□□ -1.38
SNRPA1P09661 MIR4509-3-201ENST00000578671 94 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 MIR4509-2-201ENST00000583920 94 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.44□□□□□ -1.38
SNRPA1P09661 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.44□□□□□ -1.38
SNRPA1P09661 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.44□□□□□ -1.38
SNRPA1P09661 AC093424.1-201ENST00000604999 338 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 AL391358.1-201ENST00000605342 190 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 AC026741.1-201ENST00000605892 482 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.44□□□□□ -1.38
SNRPA1P09661 MIR4509-1-201ENST00000618224 94 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 Z99129.2-201ENST00000619967 314 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SNRPA1P09661 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SNRPA1P09661 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.44□□□□□ -1.38
SNRPA1P09661 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.44□□□□□ -1.38
SNRPA1P09661 MTND2P41-201ENST00000637599 773 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SNRPA1P09661 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SNRPA1P09661 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SNRPA1P09661 AC116158.1-201ENST00000560231 2129 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.44□□□□□ -1.38
SNRPA1P09661 MFSD8-216ENST00000641147 4009 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 AC099654.2-201ENST00000433031 1980 ntBASIC6.44□□□□□ -1.38
SNRPA1P09661 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SNRPA1P09661 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SNRPA1P09661 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.43□□□□□ -1.38
SNRPA1P09661 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNRPA1P09661 HSPD1P14-201ENST00000432666 1618 ntBASIC6.43□□□□□ -1.38
SNRPA1P09661 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SNRPA1P09661 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SNRPA1P09661 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SNRPA1P09661 RNA5SP453-201ENST00000362503 119 ntBASIC6.43□□□□□ -1.38
SNRPA1P09661 RNU6-1331P-201ENST00000363658 106 ntBASIC6.43□□□□□ -1.38
SNRPA1P09661 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNRPA1P09661 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SNRPA1P09661 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SNRPA1P09661 RPL10P10-201ENST00000403509 664 ntBASIC6.43□□□□□ -1.38
SNRPA1P09661 HYALP1-201ENST00000417674 1279 ntBASIC6.43□□□□□ -1.38
SNRPA1P09661 RPS26P4-201ENST00000431743 355 ntBASIC6.43□□□□□ -1.38
SNRPA1P09661 AL138878.2-201ENST00000440581 1241 ntBASIC6.43□□□□□ -1.38
SNRPA1P09661 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.43□□□□□ -1.38
SNRPA1P09661 GAPDHP14-201ENST00000450472 937 ntBASIC6.43□□□□□ -1.38
SNRPA1P09661 AL513533.1-201ENST00000453728 415 ntBASIC6.43□□□□□ -1.38
SNRPA1P09661 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.43□□□□□ -1.38
SNRPA1P09661 RN7SL860P-201ENST00000473738 223 ntBASIC6.43□□□□□ -1.38
SNRPA1P09661 AC093890.1-201ENST00000502554 540 ntBASIC6.43□□□□□ -1.38
SNRPA1P09661 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.43□□□□□ -1.38
SNRPA1P09661 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.43□□□□□ -1.38
SNRPA1P09661 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC6.43□□□□□ -1.38
SNRPA1P09661 OR8G5-201ENST00000524943 1041 ntBASIC6.43□□□□□ -1.38
SNRPA1P09661 AC093014.1-201ENST00000548926 724 ntBASIC6.43□□□□□ -1.38
SNRPA1P09661 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC6.43□□□□□ -1.38
SNRPA1P09661 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC6.43□□□□□ -1.38
SNRPA1P09661 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC6.43□□□□□ -1.38
SNRPA1P09661 AC079075.1-201ENST00000559543 878 ntBASIC6.43□□□□□ -1.38
SNRPA1P09661 RN7SL290P-201ENST00000578661 300 ntBASIC6.43□□□□□ -1.38
SNRPA1P09661 AC091042.1-201ENST00000579213 173 ntBASIC6.43□□□□□ -1.38
SNRPA1P09661 AP001160.4-201ENST00000596971 382 ntBASIC6.43□□□□□ -1.38
SNRPA1P09661 AC234771.5-201ENST00000600161 514 ntBASIC6.43□□□□□ -1.38
SNRPA1P09661 ELOCP35-201ENST00000604289 336 ntBASIC6.43□□□□□ -1.38
SNRPA1P09661 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.43□□□□□ -1.38
SNRPA1P09661 MIR6780A-201ENST00000615089 68 ntBASIC6.43□□□□□ -1.38
SNRPA1P09661 AC120349.3-201ENST00000624377 529 ntBASIC6.43□□□□□ -1.38
SNRPA1P09661 AC019226.2-201ENST00000625973 424 ntBASIC6.43□□□□□ -1.38
SNRPA1P09661 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SNRPA1P09661 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SNRPA1P09661 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNRPA1P09661 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNRPA1P09661 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.43□□□□□ -1.38
SNRPA1P09661 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNRPA1P09661 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.43□□□□□ -1.38
SNRPA1P09661 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SNRPA1P09661 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.42□□□□□ -1.38
SNRPA1P09661 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SNRPA1P09661 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SNRPA1P09661 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SNRPA1P09661 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
SNRPA1P09661 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SNRPA1P09661 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SNRPA1P09661 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SNRPA1P09661 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNRPA1P09661 RNA5SP191-201ENST00000362585 102 ntBASIC6.42□□□□□ -1.38
SNRPA1P09661 RNU6-697P-201ENST00000363348 107 ntBASIC6.42□□□□□ -1.38
SNRPA1P09661 RNU4-40P-201ENST00000364351 143 ntBASIC6.42□□□□□ -1.38
SNRPA1P09661 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.42□□□□□ -1.38
SNRPA1P09661 AC013442.1-201ENST00000397347 228 ntBASIC6.42□□□□□ -1.38
SNRPA1P09661 TCEA1P2-201ENST00000420496 906 ntBASIC6.42□□□□□ -1.38
SNRPA1P09661 AC004074.1-201ENST00000421810 1063 ntBASIC6.42□□□□□ -1.38
SNRPA1P09661 COX6CP13-201ENST00000428703 226 ntBASIC6.42□□□□□ -1.38
SNRPA1P09661 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC6.42□□□□□ -1.38
SNRPA1P09661 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms