Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.65□□□□□ -1.34
HMGB1P09429 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC6.65□□□□□ -1.34
HMGB1P09429 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.65□□□□□ -1.34
HMGB1P09429 AC002542.1-201ENST00000440683 193 ntBASIC6.65□□□□□ -1.34
HMGB1P09429 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.65□□□□□ -1.34
HMGB1P09429 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.65□□□□□ -1.34
HMGB1P09429 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.65□□□□□ -1.34
HMGB1P09429 HMGN1P5-201ENST00000448591 263 ntBASIC6.65□□□□□ -1.34
HMGB1P09429 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.65□□□□□ -1.34
HMGB1P09429 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.65□□□□□ -1.34
HMGB1P09429 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.65□□□□□ -1.34
HMGB1P09429 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.65□□□□□ -1.34
HMGB1P09429 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
HMGB1P09429 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.65□□□□□ -1.34
HMGB1P09429 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.65□□□□□ -1.34
HMGB1P09429 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.65□□□□□ -1.34
HMGB1P09429 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.65□□□□□ -1.34
HMGB1P09429 AGGF1P9-201ENST00000561884 913 ntBASIC6.65□□□□□ -1.34
HMGB1P09429 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.65□□□□□ -1.34
HMGB1P09429 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.65□□□□□ -1.34
HMGB1P09429 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.65□□□□□ -1.34
HMGB1P09429 NDUFA5P11-201ENST00000567995 343 ntBASIC6.65□□□□□ -1.34
HMGB1P09429 AP001180.3-201ENST00000582221 145 ntBASIC6.65□□□□□ -1.34
HMGB1P09429 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HMGB1P09429 AC004948.1-201ENST00000609858 672 ntBASIC6.65□□□□□ -1.34
HMGB1P09429 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
HMGB1P09429 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.65□□□□□ -1.34
HMGB1P09429 AC022893.2-201ENST00000564832 3296 ntBASIC6.65□□□□□ -1.34
HMGB1P09429 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HMGB1P09429 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
HMGB1P09429 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
HMGB1P09429 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.65□□□□□ -1.35
HMGB1P09429 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
HMGB1P09429 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
HMGB1P09429 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.65□□□□□ -1.35
HMGB1P09429 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
HMGB1P09429 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HMGB1P09429 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HMGB1P09429 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.64□□□□□ -1.35
HMGB1P09429 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HMGB1P09429 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HMGB1P09429 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.64□□□□□ -1.35
HMGB1P09429 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
HMGB1P09429 RNA5SP394-201ENST00000364216 119 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 RN7SKP28-201ENST00000364770 305 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 U3.15-201ENST00000365398 212 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 RNA5SP131-201ENST00000365452 119 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
HMGB1P09429 RNU6-932P-201ENST00000391108 106 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 AL009179.1-201ENST00000406085 265 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 AL355615.1-201ENST00000406187 641 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.64□□□□□ -1.35
HMGB1P09429 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.64□□□□□ -1.35
HMGB1P09429 RWDD4P2-201ENST00000426392 563 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.64□□□□□ -1.35
HMGB1P09429 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.64□□□□□ -1.35
HMGB1P09429 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.64□□□□□ -1.35
HMGB1P09429 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.64□□□□□ -1.35
HMGB1P09429 HMGN1P2-201ENST00000445197 310 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC6.64□□□□□ -1.35
HMGB1P09429 NDUFS5P3-201ENST00000450668 321 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 LRRC37A14P-201ENST00000452297 462 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 CCNB1IP1P3-201ENST00000454702 829 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 RPL5P30-201ENST00000465511 891 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 UBFD1P1-201ENST00000473259 814 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HMGB1P09429 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HMGB1P09429 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.64□□□□□ -1.35
HMGB1P09429 AC090686.1-201ENST00000481577 749 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 RPS27P23-201ENST00000487608 251 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.64□□□□□ -1.35
HMGB1P09429 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC6.64□□□□□ -1.35
HMGB1P09429 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HMGB1P09429 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.64□□□□□ -1.35
HMGB1P09429 AC147055.3-201ENST00000510547 851 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 AC006499.4-201ENST00000510947 694 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 RNU6-202P-201ENST00000515998 96 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 RNU6-615P-201ENST00000516065 106 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC6.64□□□□□ -1.35
HMGB1P09429 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.64□□□□□ -1.35
HMGB1P09429 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.64□□□□□ -1.35
HMGB1P09429 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.64□□□□□ -1.35
HMGB1P09429 AC124068.1-201ENST00000563131 678 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 AC116553.2-201ENST00000564203 463 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.64□□□□□ -1.35
HMGB1P09429 AL139124.1-201ENST00000609123 421 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 AC008759.3-201ENST00000613300 508 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HMGB1P09429 AL356118.1-201ENST00000635272 1078 ntBASIC6.64□□□□□ -1.35
HMGB1P09429 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
HMGB1P09429 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.64□□□□□ -1.35
HMGB1P09429 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.64□□□□□ -1.35
HMGB1P09429 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.64□□□□□ -1.35
HMGB1P09429 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.64□□□□□ -1.35
HMGB1P09429 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HMGB1P09429 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
HMGB1P09429 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
HMGB1P09429 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
HMGB1P09429 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
HMGB1P09429 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms