Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC2.78□□□□□ -1.96
APOBP04114 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC2.78□□□□□ -1.96
APOBP04114 GTF2IP22-201ENST00000554443 182 ntBASIC2.78□□□□□ -1.96
APOBP04114 MEG8-217ENST00000556637 924 ntTSL 5 BASIC2.78□□□□□ -1.96
APOBP04114 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC2.78□□□□□ -1.96
APOBP04114 AC096553.1-201ENST00000605169 829 ntBASIC2.78□□□□□ -1.96
APOBP04114 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC2.78□□□□□ -1.96
APOBP04114 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC2.78□□□□□ -1.96
APOBP04114 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
APOBP04114 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
APOBP04114 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
APOBP04114 AL603750.1-201ENST00000624216 1717 ntBASIC2.78□□□□□ -1.96
APOBP04114 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
APOBP04114 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC2.78□□□□□ -1.97
APOBP04114 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC2.78□□□□□ -1.97
APOBP04114 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC2.78□□□□□ -1.97
APOBP04114 RNU1-20P-201ENST00000363314 162 ntBASIC2.78□□□□□ -1.97
APOBP04114 ADAM24P-201ENST00000398655 2101 ntBASIC2.78□□□□□ -1.97
APOBP04114 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.78□□□□□ -1.97
APOBP04114 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC2.78□□□□□ -1.97
APOBP04114 RN7SKP13-201ENST00000515933 244 ntBASIC2.78□□□□□ -1.97
APOBP04114 IPO5P1-202ENST00000600039 287 ntBASIC2.78□□□□□ -1.97
APOBP04114 AL160281.1-201ENST00000605307 311 ntBASIC2.78□□□□□ -1.97
APOBP04114 AL445363.3-201ENST00000623080 671 ntBASIC2.78□□□□□ -1.97
APOBP04114 AC006453.5-201ENST00000636451 619 ntBASIC2.78□□□□□ -1.97
APOBP04114 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC2.78□□□□□ -1.97
APOBP04114 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC2.78□□□□□ -1.97
APOBP04114 LINC00622-201ENST00000562811 1570 ntBASIC2.77□□□□□ -1.97
APOBP04114 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
APOBP04114 RN7SKP17-201ENST00000411242 351 ntBASIC2.77□□□□□ -1.97
APOBP04114 AC140479.3-201ENST00000418944 1126 ntBASIC2.77□□□□□ -1.97
APOBP04114 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC2.77□□□□□ -1.97
APOBP04114 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC2.77□□□□□ -1.97
APOBP04114 AC112230.1-201ENST00000604342 547 ntBASIC2.77□□□□□ -1.97
APOBP04114 uc_338.13-201ENST00000618243 179 ntBASIC2.77□□□□□ -1.97
APOBP04114 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC2.77□□□□□ -1.97
APOBP04114 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC2.77□□□□□ -1.97
APOBP04114 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
APOBP04114 AC140134.1-201ENST00000511830 3544 ntBASIC2.77□□□□□ -1.97
APOBP04114 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
APOBP04114 MIR491-201ENST00000384877 84 ntBASIC2.77□□□□□ -1.97
APOBP04114 COX6CP13-201ENST00000428703 226 ntBASIC2.77□□□□□ -1.97
APOBP04114 ATP5G1P3-201ENST00000463301 410 ntBASIC2.77□□□□□ -1.97
APOBP04114 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC2.77□□□□□ -1.97
APOBP04114 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.77□□□□□ -1.97
APOBP04114 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC2.77□□□□□ -1.97
APOBP04114 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.77□□□□□ -1.97
APOBP04114 AGGF1P9-201ENST00000561884 913 ntBASIC2.77□□□□□ -1.97
APOBP04114 AL121890.2-201ENST00000617644 465 ntBASIC2.77□□□□□ -1.97
APOBP04114 MIR7975-201ENST00000619350 68 ntBASIC2.77□□□□□ -1.97
APOBP04114 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC2.77□□□□□ -1.97
APOBP04114 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
APOBP04114 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC2.77□□□□□ -1.97
APOBP04114 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
APOBP04114 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
APOBP04114 CR1-203ENST00000367051 7469 ntTSL 5 BASIC2.77□□□□□ -1.97
APOBP04114 CR1-204ENST00000367052 7469 ntTSL 5 BASIC2.77□□□□□ -1.97
APOBP04114 CR1-205ENST00000367053 7469 ntTSL 5 BASIC2.77□□□□□ -1.97
APOBP04114 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
APOBP04114 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
APOBP04114 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
APOBP04114 AC104260.2-201ENST00000623551 3497 ntBASIC2.77□□□□□ -1.97
APOBP04114 AP001157.1-201ENST00000550837 2339 ntBASIC2.77□□□□□ -1.97
APOBP04114 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
APOBP04114 AL137141.1-201ENST00000624622 4836 ntBASIC2.77□□□□□ -1.97
APOBP04114 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
APOBP04114 MIR7-3-201ENST00000384898 110 ntBASIC2.77□□□□□ -1.97
APOBP04114 COX5BP7-201ENST00000414780 274 ntBASIC2.77□□□□□ -1.97
APOBP04114 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC2.77□□□□□ -1.97
APOBP04114 RPL23AP38-201ENST00000423801 469 ntBASIC2.77□□□□□ -1.97
APOBP04114 PPIAP13-201ENST00000434706 478 ntBASIC2.77□□□□□ -1.97
APOBP04114 CYCSP32-201ENST00000440548 321 ntBASIC2.77□□□□□ -1.97
APOBP04114 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC2.77□□□□□ -1.97
APOBP04114 AC104763.1-201ENST00000475274 360 ntBASIC2.77□□□□□ -1.97
APOBP04114 RPL35P6-201ENST00000490024 372 ntBASIC2.77□□□□□ -1.97
APOBP04114 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC2.77□□□□□ -1.97
APOBP04114 AC107982.3-201ENST00000584957 985 ntBASIC2.77□□□□□ -1.97
APOBP04114 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC2.77□□□□□ -1.97
APOBP04114 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC2.77□□□□□ -1.97
APOBP04114 AC091979.2-201ENST00000607514 214 ntBASIC2.77□□□□□ -1.97
APOBP04114 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.77□□□□□ -1.97
APOBP04114 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC2.77□□□□□ -1.97
APOBP04114 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
APOBP04114 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
APOBP04114 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
APOBP04114 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
APOBP04114 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
APOBP04114 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
APOBP04114 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC2.77□□□□□ -1.97
APOBP04114 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
APOBP04114 RNU1-14P-201ENST00000362759 152 ntBASIC2.76□□□□□ -1.97
APOBP04114 RNU6ATAC-201ENST00000408749 126 ntBASIC2.76□□□□□ -1.97
APOBP04114 AC092647.1-201ENST00000420654 287 ntBASIC2.76□□□□□ -1.97
APOBP04114 PDSS1P1-201ENST00000422953 1114 ntBASIC2.76□□□□□ -1.97
APOBP04114 AL050321.1-201ENST00000432363 400 ntBASIC2.76□□□□□ -1.97
APOBP04114 AC023271.1-201ENST00000445936 1090 ntBASIC2.76□□□□□ -1.97
APOBP04114 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms