Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.39□□□□□ -1.55
MSI1O43347 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MSI1O43347 AC093849.1-201ENST00000563631 2209 ntBASIC5.39□□□□□ -1.55
MSI1O43347 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MSI1O43347 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
MSI1O43347 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
MSI1O43347 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MSI1O43347 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
MSI1O43347 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
MSI1O43347 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MSI1O43347 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MSI1O43347 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
MSI1O43347 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MSI1O43347 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MSI1O43347 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
MSI1O43347 SNURFL-201ENST00000309296 343 ntBASIC5.38□□□□□ -1.55
MSI1O43347 RNU6-468P-201ENST00000384003 109 ntBASIC5.38□□□□□ -1.55
MSI1O43347 HMGB3P19-201ENST00000403971 560 ntBASIC5.38□□□□□ -1.55
MSI1O43347 NUDT19P3-201ENST00000404698 555 ntBASIC5.38□□□□□ -1.55
MSI1O43347 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.38□□□□□ -1.55
MSI1O43347 AL355615.1-201ENST00000406187 641 ntBASIC5.38□□□□□ -1.55
MSI1O43347 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MSI1O43347 AC096533.1-201ENST00000411645 353 ntBASIC5.38□□□□□ -1.55
MSI1O43347 GPS2P1-201ENST00000411761 986 ntBASIC5.38□□□□□ -1.55
MSI1O43347 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.38□□□□□ -1.55
MSI1O43347 AL445183.3-201ENST00000414168 502 ntBASIC5.38□□□□□ -1.55
MSI1O43347 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.38□□□□□ -1.55
MSI1O43347 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MSI1O43347 BTF3P9-201ENST00000418784 283 ntBASIC5.38□□□□□ -1.55
MSI1O43347 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.38□□□□□ -1.55
MSI1O43347 AC044797.1-201ENST00000445744 679 ntBASIC5.38□□□□□ -1.55
MSI1O43347 HMGB1P26-201ENST00000452520 628 ntBASIC5.38□□□□□ -1.55
MSI1O43347 AC069277.2-201ENST00000454211 432 ntBASIC5.38□□□□□ -1.55
MSI1O43347 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.38□□□□□ -1.55
MSI1O43347 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.38□□□□□ -1.55
MSI1O43347 RPL32P9-201ENST00000487963 407 ntBASIC5.38□□□□□ -1.55
MSI1O43347 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.38□□□□□ -1.55
MSI1O43347 AC147055.3-201ENST00000510547 851 ntBASIC5.38□□□□□ -1.55
MSI1O43347 ASNSP4-201ENST00000511103 447 ntBASIC5.38□□□□□ -1.55
MSI1O43347 AC110775.1-201ENST00000513721 462 ntBASIC5.38□□□□□ -1.55
MSI1O43347 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.38□□□□□ -1.55
MSI1O43347 AC118942.1-201ENST00000529674 1035 ntBASIC5.38□□□□□ -1.55
MSI1O43347 AC087894.1-201ENST00000538359 518 ntBASIC5.38□□□□□ -1.55
MSI1O43347 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.38□□□□□ -1.55
MSI1O43347 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.38□□□□□ -1.55
MSI1O43347 AC092490.3-201ENST00000545370 572 ntBASIC5.38□□□□□ -1.55
MSI1O43347 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.38□□□□□ -1.55
MSI1O43347 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MSI1O43347 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.38□□□□□ -1.55
MSI1O43347 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.38□□□□□ -1.55
MSI1O43347 AC087763.1-201ENST00000603391 286 ntBASIC5.38□□□□□ -1.55
MSI1O43347 AC118658.2-201ENST00000618697 459 ntBASIC5.38□□□□□ -1.55
MSI1O43347 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.38□□□□□ -1.55
MSI1O43347 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.38□□□□□ -1.55
MSI1O43347 AC097655.1-201ENST00000635075 318 ntBASIC5.38□□□□□ -1.55
MSI1O43347 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
MSI1O43347 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MSI1O43347 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
MSI1O43347 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MSI1O43347 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MSI1O43347 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.38□□□□□ -1.55
MSI1O43347 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MSI1O43347 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
MSI1O43347 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MSI1O43347 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
MSI1O43347 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.37□□□□□ -1.55
MSI1O43347 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.37□□□□□ -1.55
MSI1O43347 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.37□□□□□ -1.55
MSI1O43347 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
MSI1O43347 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
MSI1O43347 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
MSI1O43347 RNU5E-10P-201ENST00000363506 118 ntBASIC5.37□□□□□ -1.55
MSI1O43347 RNA5SP223-201ENST00000365174 120 ntBASIC5.37□□□□□ -1.55
MSI1O43347 OR1L6-202ENST00000373684 1044 ntBASIC5.37□□□□□ -1.55
MSI1O43347 RNU1-74P-201ENST00000384108 171 ntBASIC5.37□□□□□ -1.55
MSI1O43347 RNU6-1005P-201ENST00000384519 107 ntBASIC5.37□□□□□ -1.55
MSI1O43347 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.37□□□□□ -1.55
MSI1O43347 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.37□□□□□ -1.55
MSI1O43347 RPL26P37-201ENST00000411983 438 ntBASIC5.37□□□□□ -1.55
MSI1O43347 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.37□□□□□ -1.55
MSI1O43347 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.37□□□□□ -1.55
MSI1O43347 MTCYBP7-201ENST00000419540 1134 ntBASIC5.37□□□□□ -1.55
MSI1O43347 AC007394.1-201ENST00000421941 531 ntBASIC5.37□□□□□ -1.55
MSI1O43347 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.37□□□□□ -1.55
MSI1O43347 AC241520.1-201ENST00000422654 1099 ntBASIC5.37□□□□□ -1.55
MSI1O43347 AL034379.1-201ENST00000423216 253 ntBASIC5.37□□□□□ -1.55
MSI1O43347 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.37□□□□□ -1.55
MSI1O43347 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.37□□□□□ -1.55
MSI1O43347 AL161722.2-201ENST00000434731 981 ntBASIC5.37□□□□□ -1.55
MSI1O43347 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.37□□□□□ -1.55
MSI1O43347 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.37□□□□□ -1.55
MSI1O43347 AC098826.2-201ENST00000452011 651 ntBASIC5.37□□□□□ -1.55
MSI1O43347 DNAJB5P1-201ENST00000454004 806 ntBASIC5.37□□□□□ -1.55
MSI1O43347 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.37□□□□□ -1.55
MSI1O43347 RPL7AP6-201ENST00000477943 801 ntBASIC5.37□□□□□ -1.55
MSI1O43347 AC023424.1-201ENST00000496058 459 ntBASIC5.37□□□□□ -1.55
MSI1O43347 SUMO2P5-201ENST00000506790 245 ntBASIC5.37□□□□□ -1.55
MSI1O43347 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.37□□□□□ -1.55
MSI1O43347 AC133963.2-201ENST00000513686 578 ntBASIC5.37□□□□□ -1.55
MSI1O43347 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms