Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RN7SKP115-201ENST00000363177 317 ntBASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 AL050305.1-201ENST00000399993 1230 ntBASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 RN7SKP273-201ENST00000411392 314 ntBASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 AL591848.1-201ENST00000413092 322 ntBASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 AC092647.3-201ENST00000443044 633 ntBASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 RPS5P7-201ENST00000456664 608 ntBASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 AC012158.1-204ENST00000483430 465 ntBASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 GAPDHP56-201ENST00000506031 988 ntBASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 RNA5SP34-201ENST00000516887 130 ntBASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 AC013701.1-201ENST00000522657 465 ntBASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 AC022616.2-201ENST00000523185 300 ntBASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 AC100770.1-201ENST00000532310 322 ntBASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 AC115989.2-201ENST00000578640 563 ntBASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 MIR1269B-201ENST00000580405 75 ntBASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 AC023509.5-201ENST00000617434 807 ntBASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
TRIM49D1C9J1S8 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 U8.4-201ENST00000363626 134 ntBASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 DPPA2P3-201ENST00000411853 655 ntBASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 RPS27AP15-201ENST00000447672 466 ntBASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 AL935212.3-201ENST00000450729 284 ntBASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 AC090013.1-201ENST00000485147 480 ntBASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 AC098799.3-201ENST00000506095 438 ntBASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 AC134698.5-201ENST00000519444 336 ntBASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 AC090151.1-201ENST00000520784 730 ntBASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 NPM1P45-201ENST00000583151 559 ntBASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 OR7E18P-201ENST00000592589 702 ntBASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 AC009163.6-201ENST00000612367 342 ntBASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 AC135352.1-201ENST00000506173 1418 ntBASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
TRIM49D1C9J1S8 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 RNU1-94P-201ENST00000362627 173 ntBASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 RNU4-4P-201ENST00000364588 130 ntBASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 RN7SKP278-201ENST00000410504 342 ntBASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 AC097523.2-201ENST00000435551 652 ntBASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 H2AFZP5-201ENST00000446960 382 ntBASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 AC109462.1-201ENST00000491087 368 ntBASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 IGLV3-26-201ENST00000520756 302 ntBASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 AL354950.1-201ENST00000614150 568 ntBASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 AC091905.2-201ENST00000623143 306 ntBASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 AC132825.8-201ENST00000640783 297 ntBASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 AC005332.5-201ENST00000591222 2919 ntBASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 AC000123.3-201ENST00000624029 4975 ntBASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 NAMPTP1-201ENST00000440465 2514 ntBASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM49D1C9J1S8 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms