Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC108467.2-201ENST00000617640 1597 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 AL590240.1-201ENST00000334118 313 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 RN7SKP149-201ENST00000363008 344 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 RNU1-63P-201ENST00000383902 164 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 AC092642.1-201ENST00000392417 425 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 GAPDHP15-201ENST00000398586 975 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 FCF1P5-201ENST00000406490 482 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 SPTLC1P2-201ENST00000407089 121 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 RN7SKP100-201ENST00000411258 284 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 ATG4AP1-201ENST00000416893 538 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 BX510359.2-201ENST00000417920 305 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 RPL6P21-201ENST00000418672 846 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 AC005154.2-201ENST00000438110 379 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 OR2AF1P-201ENST00000454899 889 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 SCARNA10-201ENST00000459255 330 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 AC110749.1-201ENST00000462007 357 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 RPL23AP65-201ENST00000475608 468 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 OR5M14P-201ENST00000506803 618 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 DPRXP4-201ENST00000578053 568 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 AC233702.9-201ENST00000581528 203 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 AC073091.2-201ENST00000603205 907 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 AC023762.1-201ENST00000603280 584 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 SDR42E1P1-201ENST00000611327 477 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 AL353726.1-201ENST00000614041 1000 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 AC091905.2-201ENST00000623143 306 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 MAPK10-286ENST00000641208 8747 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 MAPK10-263ENST00000641052 4307 ntBASIC4.12□□□□□ -1.75
TRAV27A0A087WT01 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 HCFC2P1-201ENST00000392864 1592 ntBASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 DDX18P6-201ENST00000450119 1997 ntBASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 NXPH1-205ENST00000602349 1953 ntBASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 UGT2B26P-201ENST00000508672 1613 ntBASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 RPL21P108-201ENST00000413857 481 ntBASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 RPL23AP25-201ENST00000430973 463 ntBASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 RPS27AP15-201ENST00000447672 466 ntBASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 AC012158.1-204ENST00000483430 465 ntBASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 AC004453.1-201ENST00000487895 408 ntBASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 ARL4AP1-201ENST00000503220 705 ntBASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 AC007016.1-201ENST00000512110 244 ntBASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 OR10D4P-201ENST00000525892 951 ntBASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 AC098935.2-201ENST00000604222 466 ntBASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 AC091979.2-201ENST00000607514 214 ntBASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 AC090510.2-201ENST00000617465 629 ntBASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 AC068870.2-201ENST00000620635 389 ntBASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 AC132825.1-201ENST00000463573 2247 ntBASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 AC010928.1-201ENST00000592477 1447 ntBASIC4.11□□□□□ -1.75
TRAV27A0A087WT01 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms