Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AP002530.1-201ENST00000405705 684 ntBASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 COX6CP17-201ENST00000421389 185 ntBASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 RPL5P25-201ENST00000441148 775 ntBASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 AC083899.1-201ENST00000454465 3819 ntBASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 RN7SL385P-201ENST00000468873 276 ntBASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 AC058823.1-201ENST00000485315 474 ntBASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 AC090543.1-201ENST00000492168 485 ntBASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 SNRPGP1-201ENST00000553864 222 ntBASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 AL031320.1-201ENST00000604177 357 ntBASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 AC012414.7-202ENST00000622705 1090 ntBASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 AC138965.3-201ENST00000623875 498 ntBASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 AC093535.2-201ENST00000624769 2326 ntBASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 SMG1P6-201ENST00000532337 2930 ntBASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 AC104118.1-201ENST00000607625 1589 ntBASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AC009313.2-201ENST00000417893 1941 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 SNORA62-201ENST00000365493 153 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 RNA5SP187-201ENST00000384400 119 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 OR8V1P-201ENST00000395193 873 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 RPS16P5-201ENST00000406501 404 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AC119751.6-201ENST00000416712 186 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AL590609.2-201ENST00000421430 368 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 EI24P4-201ENST00000423683 1078 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AC099670.2-201ENST00000435130 321 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 RPS29P10-201ENST00000439197 166 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 PTMAP3-201ENST00000447474 330 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 TPT1P12-201ENST00000448968 492 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AC007688.1-201ENST00000475592 759 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AC008897.1-201ENST00000494006 347 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 COX6B1P5-201ENST00000509843 249 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 OR7E128P-201ENST00000532736 1024 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 UBE2FP2-201ENST00000566646 462 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 SS18L2P2-201ENST00000583960 235 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AL627230.1-201ENST00000613077 211 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AL591926.8-201ENST00000616876 211 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 uc_338.7-201ENST00000621834 124 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AC005618.4-201ENST00000625053 554 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AP000756.2-201ENST00000624168 2567 ntBASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHGA1Q9Y5H4 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHGA1Q9Y5H4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA1Q9Y5H4 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA1Q9Y5H4 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms