Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 RNU4-4P-201ENST00000364588 130 ntBASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 AL589647.1-201ENST00000402485 466 ntBASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 RN7SKP97-201ENST00000410966 333 ntBASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 GJA6P-201ENST00000415117 1042 ntBASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 MRPS33P4-201ENST00000434892 317 ntBASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 AC092647.3-201ENST00000443044 633 ntBASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 OR7E125P-201ENST00000443450 846 ntBASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 MRPL35P2-201ENST00000448009 511 ntBASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 RPS17P2-201ENST00000461663 408 ntBASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 RPL7AP10-201ENST00000481016 791 ntBASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 AC016550.3-201ENST00000515706 767 ntBASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 RN7SKP147-201ENST00000517154 244 ntBASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 AC105031.1-201ENST00000518550 476 ntBASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 AC116553.2-201ENST00000564203 463 ntBASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 MIR3936-201ENST00000584304 110 ntBASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 EIF1P5-201ENST00000585002 234 ntBASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 AC068020.1-201ENST00000594215 661 ntBASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 AC130352.1-201ENST00000602979 661 ntBASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.73□□□□□ -1.65
ATG4BQ9Y4P1 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AC010329.2-201ENST00000595195 2737 ntBASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 RNA5SP428-201ENST00000365129 132 ntBASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AL645733.1-201ENST00000402250 217 ntBASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 RNA5SP296-201ENST00000410523 111 ntBASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 RPA2P2-201ENST00000419698 796 ntBASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AC104333.2-201ENST00000422630 192 ntBASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 RPS27P18-201ENST00000431701 247 ntBASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 RSL24D1P8-201ENST00000434442 492 ntBASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 RPL35AP21-201ENST00000437667 333 ntBASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 TCEA1P3-201ENST00000443005 880 ntBASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AC002553.2-201ENST00000453217 340 ntBASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 RN7SL97P-201ENST00000486780 299 ntBASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 MTCYBP19-201ENST00000517463 1124 ntBASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AC084759.1-201ENST00000561168 290 ntBASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AGGF1P9-201ENST00000561884 913 ntBASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AL390726.5-202ENST00000564800 256 ntBASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AC011840.5-201ENST00000582125 771 ntBASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 MIR6730-201ENST00000622213 67 ntBASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AC073869.10-201ENST00000642016 354 ntBASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 HSPA8P17-201ENST00000427029 1382 ntBASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AC100778.3-201ENST00000580060 1750 ntBASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.72□□□□□ -1.65
ATG4BQ9Y4P1 AC068446.1-201ENST00000556425 1549 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms