Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 AL445528.2-201ENST00000620582 470 ntBASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 AC015804.1-201ENST00000622935 435 ntBASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 AC083843.2-201ENST00000568248 6253 ntBASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 SMG1P4-204ENST00000523028 4131 ntBASIC5.38□□□□□ -1.55
CCSER1Q9C0I3 Z95331.1-201ENST00000623075 23112 ntBASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 RNU1-83P-201ENST00000363426 164 ntBASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 AL590762.2-201ENST00000395798 571 ntBASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 OR51B3P-201ENST00000412287 913 ntBASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 MTND4LP12-201ENST00000448237 295 ntBASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 snoU13.20-201ENST00000459180 104 ntBASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 RPL7P16-201ENST00000479738 738 ntBASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 AC104971.1-201ENST00000495117 578 ntBASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 RNU6-513P-201ENST00000516104 104 ntBASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 AC122134.1-201ENST00000565664 1104 ntBASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 IRF5P1-201ENST00000504852 2164 ntBASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 AL445487.1-201ENST00000415694 1580 ntBASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
CCSER1Q9C0I3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 RNA5SP87-201ENST00000384155 118 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 COX6B1P1-201ENST00000415962 213 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 EIF4A1P1-201ENST00000420241 934 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 AC073648.4-201ENST00000442655 781 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 SUMO2P1-206ENST00000445436 284 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 TDGF1P1-201ENST00000445734 527 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 AC104651.2-201ENST00000447549 528 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 AL445433.1-201ENST00000457507 257 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 CYCSP34-201ENST00000458172 304 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 RPS3AP41-201ENST00000462701 778 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 RN7SL591P-201ENST00000496150 292 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 SCARNA22-201ENST00000503991 125 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 RNU1-6P-201ENST00000516290 144 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 BRD9P1-201ENST00000529855 560 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 AC005000.1-201ENST00000536192 288 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 AC133555.2-201ENST00000550213 292 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 MIR4436B2-201ENST00000581415 91 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 MIR4436B1-201ENST00000583272 91 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 IMMP1LP1-201ENST00000605170 488 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 AC004948.1-201ENST00000609858 672 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 FAM27B-201ENST00000610601 213 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 AC022106.2-201ENST00000620114 757 ntBASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.36□□□□□ -1.55
CCSER1Q9C0I3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms