Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AP001542.2-201ENST00000593141 364 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 AL109653.1-201ENST00000603091 248 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 AL135786.2-201ENST00000608422 615 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 RN7SL787P-201ENST00000613000 284 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 MIR6729-201ENST00000618194 65 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 AC004943.3-201ENST00000624116 600 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 AC139792.2-201ENST00000624218 587 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 CDC27P2-201ENST00000425026 1922 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 AC020656.2-201ENST00000613291 5309 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 AL513185.3-201ENST00000433335 1300 ntBASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CTHRC1Q96CG8 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AC140134.1-201ENST00000511830 3544 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 RN7SKP185-201ENST00000362813 326 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 SFR1P1-201ENST00000403720 688 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AL590084.1-201ENST00000407885 387 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 OR4K6P-201ENST00000416478 897 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AC009518.2-201ENST00000418056 731 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 ELOCP9-201ENST00000418624 239 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AL133173.1-201ENST00000423458 397 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 RAC1P8-201ENST00000427086 527 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AC099670.2-201ENST00000435130 321 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 FTH1P16-201ENST00000435241 552 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AL008629.1-201ENST00000438615 184 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 RBMY2TP-201ENST00000451162 947 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AC023141.9-201ENST00000458734 412 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 RN7SL188P-201ENST00000469842 285 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 RN7SL717P-201ENST00000478343 297 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AC104687.1-201ENST00000485829 412 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 RPS3AP22-201ENST00000488297 769 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AC091860.1-201ENST00000505723 432 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 GCSHP4-201ENST00000538792 439 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AL442163.2-201ENST00000553912 710 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AC109446.2-201ENST00000567872 497 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AL354943.1-201ENST00000572103 781 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AC022662.1-201ENST00000580252 331 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 PIGPP4-201ENST00000584447 307 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AC015688.2-201ENST00000584523 262 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AP001269.3-201ENST00000588718 329 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AC124856.1-201ENST00000600819 896 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AL583856.2-201ENST00000606298 543 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AC139769.3-201ENST00000618383 175 ntBASIC5.19□□□□□ -1.58
CTHRC1Q96CG8 AC131159.1-201ENST00000621854 213 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms