Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AL353600.1-201ENST00000608148 251 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AL096712.1-201ENST00000614561 159 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 RPSAP73-201ENST00000614820 330 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 MIR8080-201ENST00000622224 89 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 CYP4F35P-202ENST00000636121 390 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AC119674.1-220ENST00000641502 1048 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AC009643.2-201ENST00000603543 1448 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 OR51C1P-202ENST00000641159 1444 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 AC008549.2-201ENST00000333482 706 ntBASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 SNORD65-201ENST00000391079 73 ntBASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 AL136116.2-201ENST00000404020 785 ntBASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 SNORA77-201ENST00000408716 125 ntBASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 AC006455.6-201ENST00000426192 893 ntBASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 RPS27P18-201ENST00000431701 247 ntBASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 ARL5AP3-201ENST00000439327 386 ntBASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 AL354714.3-201ENST00000447284 493 ntBASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 CLIC4P1-201ENST00000453177 535 ntBASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 EIF2S2P4-201ENST00000461070 984 ntBASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 RPL7P6-201ENST00000480903 738 ntBASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 ARL4AP1-201ENST00000503220 705 ntBASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 RNU6-941P-201ENST00000516346 108 ntBASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 AC017076.1-201ENST00000607613 578 ntBASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 MIR7109-201ENST00000613748 65 ntBASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 AL049794.2-201ENST00000616301 365 ntBASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 AC048341.3-201ENST00000619323 491 ntBASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 AC019206.1-201ENST00000621938 425 ntBASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 AC073593.1-201ENST00000624500 411 ntBASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 AC235565.1-201ENST00000456962 1325 ntBASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC71LQ8N9Z2 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 SNORA67-201ENST00000384423 137 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 SNORA70.10-201ENST00000384515 134 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AL034403.1-201ENST00000399414 885 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AL021331.1-201ENST00000402817 582 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 U3.35-201ENST00000408405 208 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms