Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 SLC35E1P1-201ENST00000419313 864 ntBASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 AC093655.2-201ENST00000425735 631 ntBASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 AC018638.3-201ENST00000461273 132 ntBASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 RPL7P48-201ENST00000461513 746 ntBASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 RN7SL423P-201ENST00000486202 304 ntBASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 SNORD116-26-201ENST00000516006 96 ntBASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 CDC42P3-201ENST00000518493 633 ntBASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 IGKV2D-10-201ENST00000520194 281 ntBASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 YWHABP2-201ENST00000540201 713 ntBASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 NMNAT1P5-201ENST00000559657 841 ntBASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 AC090079.2-201ENST00000575289 768 ntBASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 TMF1P1-201ENST00000576058 373 ntBASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 RBM22P1-201ENST00000578589 1214 ntBASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 AC244107.2-201ENST00000611773 76 ntBASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 MIR7973-1-201ENST00000614683 76 ntBASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 AC103798.2-201ENST00000624292 632 ntBASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
NUP54Q7Z3B4 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AP001029.2-203ENST00000589795 4910 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AC092376.2-201ENST00000622621 4116 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AC005294.1-201ENST00000355509 281 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 U3.7-201ENST00000363668 216 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 SNORA67-201ENST00000384423 137 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 ATP5HP3-201ENST00000396994 486 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 RPL31P52-201ENST00000407532 367 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 MORF4L1P7-201ENST00000426038 703 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AC124944.2-201ENST00000429866 1242 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 RPL5P25-201ENST00000441148 775 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 MTND2P6-201ENST00000455337 1030 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 RPS4XP12-201ENST00000461747 709 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AC108729.2-201ENST00000476543 840 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 RPS21P4-201ENST00000487122 248 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AC022133.1-201ENST00000490961 571 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 RPS12P31-201ENST00000491419 398 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AC024558.1-201ENST00000505008 528 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 PGAM1P13-201ENST00000507497 754 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AC010468.3-201ENST00000508225 458 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AC106806.2-201ENST00000509365 500 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 SNORA76.2-201ENST00000517095 137 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 CR383656.14-201ENST00000551951 406 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 IMMP1LP3-201ENST00000604197 224 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 AC005014.3-201ENST00000605985 190 ntBASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.92□□□□□ -1.62
NUP54Q7Z3B4 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms