Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AC091057.2-201ENST00000602594 792 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AL022161.1-201ENST00000604390 213 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AC012557.2-201ENST00000605919 418 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AC092954.1-201ENST00000609121 445 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AP005229.2-201ENST00000609980 697 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AC124016.2-201ENST00000610058 665 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AL669942.2-201ENST00000620352 697 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AP000550.3-201ENST00000637734 379 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AL049767.1-202ENST00000637826 242 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AC114947.2-201ENST00000565748 2125 ntBASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ZNF549Q6P9A3 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 AP005432.1-201ENST00000580891 3485 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 MIR323A-201ENST00000362199 86 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 RN7SKP162-201ENST00000363605 345 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 MIR143-201ENST00000385300 106 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 AL390316.1-201ENST00000406279 553 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 MIR1182-201ENST00000408363 97 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 AC096533.1-201ENST00000411645 353 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 AL158050.1-201ENST00000416077 457 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 MTCYBP7-201ENST00000419540 1134 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 AL606495.1-201ENST00000422100 813 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 AC092447.2-201ENST00000435487 669 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 AC245047.2-201ENST00000441060 530 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 AC006326.1-201ENST00000445465 787 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 ASNSP4-201ENST00000511103 447 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 IGKV2-18-201ENST00000522607 343 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 AC145350.1-201ENST00000567426 208 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 AC026741.1-201ENST00000605892 482 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 RNU4-5P-201ENST00000607255 135 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 RPSAP73-201ENST00000614820 330 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 MIR1264-201ENST00000616374 69 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 AL512427.1-201ENST00000618593 349 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 AC011330.2-201ENST00000621680 635 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 AL512506.2-201ENST00000624472 458 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 AC135068.12-201ENST00000637370 931 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 CASC19-264ENST00000641912 1184 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 TCP11X1-202ENST00000622971 1372 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 AC005261.6-201ENST00000623072 1387 ntBASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ZNF549Q6P9A3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.1□□□□□ -1.59
ZNF549Q6P9A3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.1□□□□□ -1.59
ZNF549Q6P9A3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
ZNF549Q6P9A3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ZNF549Q6P9A3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
ZNF549Q6P9A3 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
ZNF549Q6P9A3 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.1□□□□□ -1.59
ZNF549Q6P9A3 AL035079.1-201ENST00000405210 287 ntBASIC5.1□□□□□ -1.59
ZNF549Q6P9A3 ZNF602P-201ENST00000405929 924 ntBASIC5.1□□□□□ -1.59
ZNF549Q6P9A3 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.1□□□□□ -1.59
ZNF549Q6P9A3 RN7SKP206-201ENST00000410823 293 ntBASIC5.1□□□□□ -1.59
ZNF549Q6P9A3 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.1□□□□□ -1.59
ZNF549Q6P9A3 RPL12P43-201ENST00000420608 499 ntBASIC5.1□□□□□ -1.59
ZNF549Q6P9A3 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.1□□□□□ -1.59
ZNF549Q6P9A3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.1□□□□□ -1.59
ZNF549Q6P9A3 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.1□□□□□ -1.59
ZNF549Q6P9A3 RNFT1P2-201ENST00000443064 757 ntBASIC5.1□□□□□ -1.59
ZNF549Q6P9A3 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.1□□□□□ -1.59
ZNF549Q6P9A3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ZNF549Q6P9A3 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms