Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 RNU4-7P-201ENST00000364758 141 ntBASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 SNORA2.3-201ENST00000383920 135 ntBASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 RNU6-40P-201ENST00000384254 107 ntBASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 GSTA12P-201ENST00000402398 508 ntBASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 RPL5P19-201ENST00000404228 893 ntBASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 UBE2V1P15-201ENST00000407776 448 ntBASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 BX510359.2-201ENST00000417920 305 ntBASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 AC009963.4-201ENST00000448535 339 ntBASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 SETP12-201ENST00000514068 805 ntBASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 ENPP7P9-201ENST00000514456 627 ntBASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 LINC00557-201ENST00000563184 1279 ntBASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 TVP23CP2-201ENST00000571473 623 ntBASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 OR4H6P-202ENST00000603819 340 ntBASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 AC021106.3-201ENST00000623925 531 ntBASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 AL031595.2-201ENST00000624215 19071 ntBASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 AC006210.2-201ENST00000367074 1545 ntBASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
LYSMD4Q5XG99 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 SNORA77-201ENST00000408716 125 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AC021876.1-201ENST00000425959 359 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AL390879.2-203ENST00000426943 1121 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 MTND2P21-201ENST00000436242 1042 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 BX679664.2-201ENST00000439282 283 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AL359265.1-201ENST00000440296 795 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AL627224.1-201ENST00000448334 444 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AC234781.3-201ENST00000452540 973 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AURKAPS2-201ENST00000454983 333 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 CYCSP53-201ENST00000455540 265 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AC091180.1-201ENST00000462104 372 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 RPS12P31-201ENST00000491419 398 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AC093815.1-201ENST00000508637 280 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AC026782.2-201ENST00000510845 636 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 SOX5P1-201ENST00000524155 1127 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AC009962.1-201ENST00000567327 3813 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AC136624.4-201ENST00000573044 370 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AC005014.3-201ENST00000605985 190 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AL355802.4-201ENST00000607635 548 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AC006338.2-201ENST00000616864 791 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 OR5AC4P-202ENST00000642086 985 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AC005005.4-201ENST00000623789 16698 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 AC024341.1-201ENST00000526444 1552 ntBASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.95□□□□□ -1.62
LYSMD4Q5XG99 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LYSMD4Q5XG99 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LYSMD4Q5XG99 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
LYSMD4Q5XG99 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LYSMD4Q5XG99 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LYSMD4Q5XG99 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms