Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
LRRK2Q5S007 AC005261.2-201ENST00000593427 4258 ntBASIC4.09□□□□□ -1.76
LRRK2Q5S007 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LRRK2Q5S007 AC008079.2-201ENST00000623543 20396 ntBASIC4.09□□□□□ -1.76
LRRK2Q5S007 GNG5P2-201ENST00000372054 207 ntBASIC4.09□□□□□ -1.76
LRRK2Q5S007 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LRRK2Q5S007 AL035246.1-201ENST00000433554 1255 ntBASIC4.09□□□□□ -1.76
LRRK2Q5S007 AC016772.1-201ENST00000444170 1261 ntBASIC4.09□□□□□ -1.76
LRRK2Q5S007 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.09□□□□□ -1.76
LRRK2Q5S007 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.09□□□□□ -1.76
LRRK2Q5S007 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.09□□□□□ -1.76
LRRK2Q5S007 RPL5P32-201ENST00000454085 879 ntBASIC4.09□□□□□ -1.76
LRRK2Q5S007 AC024451.1-201ENST00000508013 779 ntBASIC4.09□□□□□ -1.76
LRRK2Q5S007 RPL23AP94-201ENST00000512518 302 ntBASIC4.09□□□□□ -1.76
LRRK2Q5S007 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC4.09□□□□□ -1.76
LRRK2Q5S007 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.09□□□□□ -1.76
LRRK2Q5S007 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.09□□□□□ -1.76
LRRK2Q5S007 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.09□□□□□ -1.76
LRRK2Q5S007 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC4.09□□□□□ -1.76
LRRK2Q5S007 AL352984.2-202ENST00000613699 155 ntBASIC4.09□□□□□ -1.76
LRRK2Q5S007 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRRK2Q5S007 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LRRK2Q5S007 AP000756.2-201ENST00000624168 2567 ntBASIC4.08□□□□□ -1.76
LRRK2Q5S007 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
LRRK2Q5S007 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRRK2Q5S007 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRRK2Q5S007 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.08□□□□□ -1.76
LRRK2Q5S007 AL603766.1-201ENST00000407763 664 ntBASIC4.08□□□□□ -1.76
LRRK2Q5S007 TCEA1P4-201ENST00000415066 844 ntBASIC4.08□□□□□ -1.76
LRRK2Q5S007 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.08□□□□□ -1.76
LRRK2Q5S007 COX6CP15-201ENST00000426313 211 ntBASIC4.08□□□□□ -1.76
LRRK2Q5S007 AC007389.2-201ENST00000434630 306 ntBASIC4.08□□□□□ -1.76
LRRK2Q5S007 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.08□□□□□ -1.76
LRRK2Q5S007 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LRRK2Q5S007 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LRRK2Q5S007 H2AFZP5-201ENST00000446960 382 ntBASIC4.08□□□□□ -1.76
LRRK2Q5S007 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.08□□□□□ -1.76
LRRK2Q5S007 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.08□□□□□ -1.76
LRRK2Q5S007 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.08□□□□□ -1.76
LRRK2Q5S007 SEPT10P1-201ENST00000517342 1162 ntBASIC4.08□□□□□ -1.76
LRRK2Q5S007 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.08□□□□□ -1.76
LRRK2Q5S007 MIR4286-201ENST00000580651 93 ntBASIC4.08□□□□□ -1.76
LRRK2Q5S007 AC005255.1-201ENST00000593748 216 ntBASIC4.08□□□□□ -1.76
LRRK2Q5S007 FAM27B-201ENST00000610601 213 ntBASIC4.08□□□□□ -1.76
LRRK2Q5S007 AC015712.7-201ENST00000615211 635 ntBASIC4.08□□□□□ -1.76
LRRK2Q5S007 MIR6875-201ENST00000617506 72 ntBASIC4.08□□□□□ -1.76
LRRK2Q5S007 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.08□□□□□ -1.76
LRRK2Q5S007 AC007529.1-201ENST00000418574 2178 ntBASIC4.08□□□□□ -1.76
LRRK2Q5S007 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LRRK2Q5S007 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.08□□□□□ -1.76
LRRK2Q5S007 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC4.08□□□□□ -1.76
LRRK2Q5S007 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LRRK2Q5S007 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
LRRK2Q5S007 AC120036.2-201ENST00000509729 1474 ntBASIC4.08□□□□□ -1.76
LRRK2Q5S007 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LRRK2Q5S007 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
LRRK2Q5S007 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.08□□□□□ -1.76
LRRK2Q5S007 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC4.08□□□□□ -1.76
LRRK2Q5S007 AC010300.1-201ENST00000600671 5134 ntBASIC4.08□□□□□ -1.76
LRRK2Q5S007 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LRRK2Q5S007 MIR372-201ENST00000362225 67 ntBASIC4.07□□□□□ -1.76
LRRK2Q5S007 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
LRRK2Q5S007 GLUD1P9-201ENST00000420997 1173 ntBASIC4.07□□□□□ -1.76
LRRK2Q5S007 MTCO1P54-201ENST00000430139 712 ntBASIC4.07□□□□□ -1.76
LRRK2Q5S007 SLC25A14P1-201ENST00000502867 901 ntBASIC4.07□□□□□ -1.76
LRRK2Q5S007 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LRRK2Q5S007 AL139124.1-201ENST00000609123 421 ntBASIC4.07□□□□□ -1.76
LRRK2Q5S007 AC021422.1-201ENST00000621212 473 ntBASIC4.07□□□□□ -1.76
LRRK2Q5S007 AP003497.2-201ENST00000624220 967 ntBASIC4.07□□□□□ -1.76
LRRK2Q5S007 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC4.07□□□□□ -1.76
LRRK2Q5S007 HSPD1P8-201ENST00000400121 1658 ntBASIC4.07□□□□□ -1.76
LRRK2Q5S007 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LRRK2Q5S007 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.07□□□□□ -1.76
LRRK2Q5S007 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LRRK2Q5S007 TCP11X1-202ENST00000622971 1372 ntBASIC4.07□□□□□ -1.76
LRRK2Q5S007 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
LRRK2Q5S007 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
LRRK2Q5S007 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
LRRK2Q5S007 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LRRK2Q5S007 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
LRRK2Q5S007 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LRRK2Q5S007 RN7SKP16-201ENST00000410180 299 ntBASIC4.07□□□□□ -1.76
LRRK2Q5S007 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.07□□□□□ -1.76
LRRK2Q5S007 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.07□□□□□ -1.76
LRRK2Q5S007 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.07□□□□□ -1.76
LRRK2Q5S007 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.07□□□□□ -1.76
LRRK2Q5S007 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LRRK2Q5S007 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.07□□□□□ -1.76
LRRK2Q5S007 AC130364.2-201ENST00000528639 604 ntBASIC4.07□□□□□ -1.76
LRRK2Q5S007 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.07□□□□□ -1.76
LRRK2Q5S007 RPL21P12-201ENST00000559810 515 ntBASIC4.07□□□□□ -1.76
LRRK2Q5S007 HNRNPCP4-201ENST00000571636 900 ntBASIC4.07□□□□□ -1.76
LRRK2Q5S007 AL133243.1-201ENST00000614487 366 ntBASIC4.07□□□□□ -1.76
LRRK2Q5S007 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.07□□□□□ -1.76
LRRK2Q5S007 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LRRK2Q5S007 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LRRK2Q5S007 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
LRRK2Q5S007 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LRRK2Q5S007 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
LRRK2Q5S007 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms