Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 RNU6-185P-201ENST00000384421 107 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 MIR143-201ENST00000385300 106 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 MCTS2P-201ENST00000394552 546 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 FCF1P5-201ENST00000406490 482 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 VTA1P1-201ENST00000414044 866 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 AL596448.1-201ENST00000415024 392 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 TCEA1P4-201ENST00000415066 844 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 AC234781.4-201ENST00000419384 244 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 AC006335.2-201ENST00000437993 330 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 AC092170.1-201ENST00000440211 356 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 AC002542.1-201ENST00000440683 193 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 AL353093.1-201ENST00000441292 436 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 LINC02210-201ENST00000444561 288 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 CASP3P1-201ENST00000446037 609 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 OTX2P1-201ENST00000450956 354 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 RPS4XP14-201ENST00000493072 781 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 AC008565.1-201ENST00000509046 885 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 ATP5F1P7-201ENST00000567330 760 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 AGGF1P6-201ENST00000569213 976 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 CU639417.4-201ENST00000623928 207 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 AC073055.1-201ENST00000456901 1621 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 OR9K1P-202ENST00000641111 3217 ntBASIC5.44□□□□□ -1.54
PTCHD3Q3KNS1 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 MTCO1P15-201ENST00000529569 1526 ntBASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 RNA5SP453-201ENST00000362503 119 ntBASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 RNA5SP131-201ENST00000365452 119 ntBASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 RNU6-729P-201ENST00000384399 107 ntBASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 RNU6-452P-201ENST00000384406 107 ntBASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 RNU6-244P-201ENST00000391028 104 ntBASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 LRRC37BP1-201ENST00000398851 714 ntBASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 AL009179.1-201ENST00000406085 265 ntBASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 AC246680.2-201ENST00000422106 389 ntBASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 EEF1A1P39-201ENST00000440791 250 ntBASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 CYCSP51-201ENST00000443545 318 ntBASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 SETD6P1-201ENST00000444575 317 ntBASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 AC011037.1-201ENST00000483964 558 ntBASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 HPRT1P2-201ENST00000505250 544 ntBASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 AP000619.2-201ENST00000546014 969 ntBASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 SS18L2P2-201ENST00000583960 235 ntBASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 VN1R78P-201ENST00000597393 564 ntBASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCHD3Q3KNS1 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms