Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC008427.1-201ENST00000503102 655 ntBASIC4.93□□□□□ -1.62
LTBQ06643 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.93□□□□□ -1.62
LTBQ06643 RNU6-276P-201ENST00000516114 96 ntBASIC4.93□□□□□ -1.62
LTBQ06643 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.93□□□□□ -1.62
LTBQ06643 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.93□□□□□ -1.62
LTBQ06643 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.93□□□□□ -1.62
LTBQ06643 MIR4646-201ENST00000580775 63 ntBASIC4.93□□□□□ -1.62
LTBQ06643 AP000919.1-202ENST00000581139 1264 ntBASIC4.93□□□□□ -1.62
LTBQ06643 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.93□□□□□ -1.62
LTBQ06643 AC025165.5-201ENST00000602802 578 ntBASIC4.93□□□□□ -1.62
LTBQ06643 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.93□□□□□ -1.62
LTBQ06643 AC108738.1-201ENST00000603703 237 ntBASIC4.93□□□□□ -1.62
LTBQ06643 AL356752.1-201ENST00000615844 593 ntBASIC4.93□□□□□ -1.62
LTBQ06643 AL118522.2-201ENST00000616045 615 ntBASIC4.93□□□□□ -1.62
LTBQ06643 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
LTBQ06643 AC010435.1-201ENST00000623353 1177 ntBASIC4.93□□□□□ -1.62
LTBQ06643 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.93□□□□□ -1.62
LTBQ06643 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.93□□□□□ -1.62
LTBQ06643 FRG1DP-201ENST00000635586 771 ntBASIC4.93□□□□□ -1.62
LTBQ06643 OR5AC4P-202ENST00000642086 985 ntBASIC4.93□□□□□ -1.62
LTBQ06643 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LTBQ06643 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LTBQ06643 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LTBQ06643 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
LTBQ06643 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.93□□□□□ -1.62
LTBQ06643 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
LTBQ06643 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.93□□□□□ -1.62
LTBQ06643 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LTBQ06643 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.93□□□□□ -1.62
LTBQ06643 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LTBQ06643 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LTBQ06643 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LTBQ06643 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
LTBQ06643 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LTBQ06643 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
LTBQ06643 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.93□□□□□ -1.62
LTBQ06643 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LTBQ06643 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.92□□□□□ -1.62
LTBQ06643 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
LTBQ06643 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.92□□□□□ -1.62
LTBQ06643 AC026523.2-201ENST00000625039 7739 ntBASIC4.92□□□□□ -1.62
LTBQ06643 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LTBQ06643 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LTBQ06643 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.92□□□□□ -1.62
LTBQ06643 RNU6-697P-201ENST00000363348 107 ntBASIC4.92□□□□□ -1.62
LTBQ06643 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LTBQ06643 SNORD56.6-201ENST00000384569 71 ntBASIC4.92□□□□□ -1.62
LTBQ06643 GAPDHP15-201ENST00000398586 975 ntBASIC4.92□□□□□ -1.62
LTBQ06643 ST13P16-201ENST00000401760 781 ntBASIC4.92□□□□□ -1.62
LTBQ06643 AL589647.1-201ENST00000402485 466 ntBASIC4.92□□□□□ -1.62
LTBQ06643 RANP4-201ENST00000413361 655 ntBASIC4.92□□□□□ -1.62
LTBQ06643 MTATP6P20-201ENST00000414147 562 ntBASIC4.92□□□□□ -1.62
LTBQ06643 AC107081.1-201ENST00000414975 361 ntBASIC4.92□□□□□ -1.62
LTBQ06643 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.92□□□□□ -1.62
LTBQ06643 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.92□□□□□ -1.62
LTBQ06643 AC092447.2-201ENST00000435487 669 ntBASIC4.92□□□□□ -1.62
LTBQ06643 AL390119.1-201ENST00000440329 312 ntBASIC4.92□□□□□ -1.62
LTBQ06643 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.92□□□□□ -1.62
LTBQ06643 MTCO1P53-201ENST00000441633 699 ntBASIC4.92□□□□□ -1.62
LTBQ06643 CEACAMP9-201ENST00000442990 513 ntBASIC4.92□□□□□ -1.62
LTBQ06643 SETD6P1-201ENST00000444575 317 ntBASIC4.92□□□□□ -1.62
LTBQ06643 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.92□□□□□ -1.62
LTBQ06643 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.92□□□□□ -1.62
LTBQ06643 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.92□□□□□ -1.62
LTBQ06643 RPL35AP19-201ENST00000469425 329 ntBASIC4.92□□□□□ -1.62
LTBQ06643 AC100832.1-201ENST00000471945 383 ntBASIC4.92□□□□□ -1.62
LTBQ06643 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.92□□□□□ -1.62
LTBQ06643 SETP6-201ENST00000479329 568 ntBASIC4.92□□□□□ -1.62
LTBQ06643 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.92□□□□□ -1.62
LTBQ06643 RPL7P6-201ENST00000480903 738 ntBASIC4.92□□□□□ -1.62
LTBQ06643 RPS4XP1-201ENST00000482189 787 ntBASIC4.92□□□□□ -1.62
LTBQ06643 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.92□□□□□ -1.62
LTBQ06643 AC015864.1-201ENST00000496512 544 ntBASIC4.92□□□□□ -1.62
LTBQ06643 MTND4LP2-201ENST00000502312 285 ntBASIC4.92□□□□□ -1.62
LTBQ06643 IGBP1P4-201ENST00000503202 879 ntBASIC4.92□□□□□ -1.62
LTBQ06643 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LTBQ06643 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.92□□□□□ -1.62
LTBQ06643 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.92□□□□□ -1.62
LTBQ06643 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.92□□□□□ -1.62
LTBQ06643 AC067904.2-201ENST00000517322 1283 ntBASIC4.92□□□□□ -1.62
LTBQ06643 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LTBQ06643 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.92□□□□□ -1.62
LTBQ06643 AC091163.3-201ENST00000518269 1144 ntBASIC4.92□□□□□ -1.62
LTBQ06643 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.92□□□□□ -1.62
LTBQ06643 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.92□□□□□ -1.62
LTBQ06643 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.92□□□□□ -1.62
LTBQ06643 AC138832.1-201ENST00000522871 556 ntBASIC4.92□□□□□ -1.62
LTBQ06643 AC004923.2-201ENST00000529649 369 ntBASIC4.92□□□□□ -1.62
LTBQ06643 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.92□□□□□ -1.62
LTBQ06643 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.92□□□□□ -1.62
LTBQ06643 AL512310.9-201ENST00000553311 948 ntBASIC4.92□□□□□ -1.62
LTBQ06643 MTCYBP23-201ENST00000558717 1102 ntBASIC4.92□□□□□ -1.62
LTBQ06643 AL109741.3-201ENST00000561748 592 ntBASIC4.92□□□□□ -1.62
LTBQ06643 AC008088.1-201ENST00000580993 280 ntBASIC4.92□□□□□ -1.62
LTBQ06643 MIR7853-201ENST00000584820 132 ntBASIC4.92□□□□□ -1.62
LTBQ06643 AC012616.1-201ENST00000600294 197 ntBASIC4.92□□□□□ -1.62
LTBQ06643 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.92□□□□□ -1.62
LTBQ06643 AC021851.1-201ENST00000608537 1082 ntBASIC4.92□□□□□ -1.62
LTBQ06643 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.92□□□□□ -1.62
LTBQ06643 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms