Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.35□□□□□ -1.55
CLRN1P58418 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.35□□□□□ -1.55
CLRN1P58418 AC006362.1-201ENST00000567392 174 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.35□□□□□ -1.55
CLRN1P58418 MIR3154-201ENST00000577829 84 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 AC119403.2-201ENST00000590960 598 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.35□□□□□ -1.55
CLRN1P58418 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.35□□□□□ -1.55
CLRN1P58418 AC107304.1-201ENST00000604229 296 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 AC018714.1-201ENST00000605028 208 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.35□□□□□ -1.55
CLRN1P58418 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.35□□□□□ -1.55
CLRN1P58418 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.35□□□□□ -1.55
CLRN1P58418 AC008443.7-201ENST00000622195 246 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 AC145207.9-201ENST00000623802 325 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.35□□□□□ -1.55
CLRN1P58418 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLRN1P58418 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLRN1P58418 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLRN1P58418 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
CLRN1P58418 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CLRN1P58418 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CLRN1P58418 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLRN1P58418 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLRN1P58418 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLRN1P58418 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLRN1P58418 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLRN1P58418 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CLRN1P58418 AC107021.2-201ENST00000567714 2095 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.35□□□□□ -1.55
CLRN1P58418 AC073365.1-203ENST00000641055 1992 ntBASIC5.35□□□□□ -1.55
CLRN1P58418 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CLRN1P58418 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLRN1P58418 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLRN1P58418 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLRN1P58418 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLRN1P58418 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLRN1P58418 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLRN1P58418 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLRN1P58418 AL354854.1-201ENST00000455940 1363 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.34□□□□□ -1.55
CLRN1P58418 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CLRN1P58418 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLRN1P58418 GNG5P2-201ENST00000372054 207 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CLRN1P58418 Y_RNA.553-201ENST00000384670 102 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.34□□□□□ -1.55
CLRN1P58418 CEACAMP8-201ENST00000413902 580 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 RPS26P38-201ENST00000414476 348 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 AL161449.1-201ENST00000414531 1199 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.34□□□□□ -1.55
CLRN1P58418 AL049610.1-201ENST00000423374 372 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.34□□□□□ -1.55
CLRN1P58418 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CLRN1P58418 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.34□□□□□ -1.55
CLRN1P58418 AL590103.1-201ENST00000434488 307 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.34□□□□□ -1.55
CLRN1P58418 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.34□□□□□ -1.55
CLRN1P58418 AC093155.1-201ENST00000440164 826 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.34□□□□□ -1.55
CLRN1P58418 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.34□□□□□ -1.55
CLRN1P58418 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.34□□□□□ -1.55
CLRN1P58418 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.34□□□□□ -1.55
CLRN1P58418 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.34□□□□□ -1.55
CLRN1P58418 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.34□□□□□ -1.55
CLRN1P58418 AC104164.1-201ENST00000460282 590 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.34□□□□□ -1.55
CLRN1P58418 RPL5P24-201ENST00000463742 885 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.34□□□□□ -1.55
CLRN1P58418 AL024509.2-201ENST00000493462 493 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.34□□□□□ -1.55
CLRN1P58418 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.34□□□□□ -1.55
CLRN1P58418 AC091965.2-201ENST00000512324 613 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 MTND1P5-201ENST00000517906 940 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 CDC42P3-201ENST00000518493 633 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.34□□□□□ -1.55
CLRN1P58418 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.34□□□□□ -1.55
CLRN1P58418 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.34□□□□□ -1.55
CLRN1P58418 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.34□□□□□ -1.55
CLRN1P58418 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.34□□□□□ -1.55
CLRN1P58418 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
CLRN1P58418 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.34□□□□□ -1.55
CLRN1P58418 AC007954.1-201ENST00000554198 494 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.34□□□□□ -1.55
CLRN1P58418 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.34□□□□□ -1.55
CLRN1P58418 AC010546.1-201ENST00000569391 485 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 ZNF415P1-201ENST00000582279 1166 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CLRN1P58418 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.34□□□□□ -1.55
CLRN1P58418 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.34□□□□□ -1.55
CLRN1P58418 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.34□□□□□ -1.55
CLRN1P58418 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.34□□□□□ -1.55
CLRN1P58418 AL021997.1-201ENST00000605757 193 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.34□□□□□ -1.55
CLRN1P58418 AC007204.2-201ENST00000615022 616 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CLRN1P58418 AC005840.5-201ENST00000619166 599 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 AC069209.1-201ENST00000619282 651 ntBASIC5.34□□□□□ -1.55
CLRN1P58418 AC099842.1-201ENST00000619919 596 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 298.7 ms