Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX2-1P43699 AC087894.1-201ENST00000538359 518 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.38□□□□□ -1.71
NKX2-1P43699 AC006512.2-201ENST00000543250 486 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 BNIP3P1-201ENST00000547295 580 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-1P43699 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX2-1P43699 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.38□□□□□ -1.71
NKX2-1P43699 AL158211.1-201ENST00000566763 763 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AC090666.1-201ENST00000578241 445 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.38□□□□□ -1.71
NKX2-1P43699 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.38□□□□□ -1.71
NKX2-1P43699 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX2-1P43699 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.38□□□□□ -1.71
NKX2-1P43699 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.38□□□□□ -1.71
NKX2-1P43699 BNIP3P38-201ENST00000601117 544 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AP000769.2-201ENST00000602344 396 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AC009027.1-201ENST00000604510 479 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AC018754.1-201ENST00000607486 925 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AC055764.2-201ENST00000610089 670 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.38□□□□□ -1.71
NKX2-1P43699 STMN1P1-201ENST00000617809 440 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AP005431.1-201ENST00000618479 319 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AP003400.3-201ENST00000624904 346 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AC010608.3-201ENST00000625048 527 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AC126544.2-201ENST00000625174 749 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NKX2-1P43699 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
NKX2-1P43699 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX2-1P43699 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-1P43699 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-1P43699 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-1P43699 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
NKX2-1P43699 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.38□□□□□ -1.71
NKX2-1P43699 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
NKX2-1P43699 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-1P43699 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.37□□□□□ -1.71
NKX2-1P43699 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-1P43699 AC006042.3-201ENST00000454684 1469 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.37□□□□□ -1.71
NKX2-1P43699 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.37□□□□□ -1.71
NKX2-1P43699 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-1P43699 HSPD1P14-201ENST00000432666 1618 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 AL137100.1-201ENST00000556703 1620 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-1P43699 RNA5SP27-201ENST00000363839 119 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
NKX2-1P43699 AC234772.1-201ENST00000377927 937 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-1P43699 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-1P43699 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-1P43699 RNU6-317P-201ENST00000384031 107 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 MIR551A-201ENST00000385042 96 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 GSTM3P2-201ENST00000412746 530 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.37□□□□□ -1.71
NKX2-1P43699 AL445183.3-201ENST00000414168 502 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.37□□□□□ -1.71
NKX2-1P43699 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX2-1P43699 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX2-1P43699 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NKX2-1P43699 DEFB130D-201ENST00000426866 237 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.37□□□□□ -1.71
NKX2-1P43699 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.37□□□□□ -1.71
NKX2-1P43699 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.37□□□□□ -1.71
NKX2-1P43699 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX2-1P43699 ARF4P4-201ENST00000439608 520 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX2-1P43699 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.37□□□□□ -1.71
NKX2-1P43699 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.37□□□□□ -1.71
NKX2-1P43699 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.37□□□□□ -1.71
NKX2-1P43699 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.37□□□□□ -1.71
NKX2-1P43699 AL035407.2-201ENST00000454090 378 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NKX2-1P43699 AC005912.1-201ENST00000495392 255 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 RN7SL649P-201ENST00000496974 275 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 AC069306.1-201ENST00000507006 843 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX2-1P43699 MTND2P32-201ENST00000521584 1038 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.37□□□□□ -1.71
NKX2-1P43699 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.37□□□□□ -1.71
NKX2-1P43699 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NKX2-1P43699 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.37□□□□□ -1.71
NKX2-1P43699 AL121594.4-201ENST00000556211 1196 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 AL390334.1-201ENST00000556395 450 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 CYCSP38-201ENST00000559840 322 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.37□□□□□ -1.71
NKX2-1P43699 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.37□□□□□ -1.71
NKX2-1P43699 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.37□□□□□ -1.71
NKX2-1P43699 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
NKX2-1P43699 AC134669.1-201ENST00000581275 672 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.37□□□□□ -1.71
NKX2-1P43699 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.37□□□□□ -1.71
NKX2-1P43699 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.37□□□□□ -1.71
NKX2-1P43699 AC125494.3-201ENST00000602759 455 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX2-1P43699 AC009779.8-202ENST00000607990 932 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 AC027449.1-201ENST00000608890 407 ntBASIC4.37□□□□□ -1.71
NKX2-1P43699 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.37□□□□□ -1.71
NKX2-1P43699 AC129778.1-202ENST00000623812 261 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 269.5 ms