Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHRNA3P32297 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHRNA3P32297 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHRNA3P32297 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CHRNA3P32297 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.18□□□□□ -1.58
CHRNA3P32297 AL109941.1-201ENST00000401925 229 ntBASIC5.18□□□□□ -1.58
CHRNA3P32297 RN7SKP97-201ENST00000410966 333 ntBASIC5.18□□□□□ -1.58
CHRNA3P32297 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.18□□□□□ -1.58
CHRNA3P32297 AC013470.3-201ENST00000420252 1194 ntBASIC5.18□□□□□ -1.58
CHRNA3P32297 GLUD1P9-201ENST00000420997 1173 ntBASIC5.18□□□□□ -1.58
CHRNA3P32297 EIF4HP2-201ENST00000424380 563 ntBASIC5.18□□□□□ -1.58
CHRNA3P32297 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHRNA3P32297 FABP7P2-201ENST00000429946 379 ntBASIC5.18□□□□□ -1.58
CHRNA3P32297 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.18□□□□□ -1.58
CHRNA3P32297 NPM1P39-201ENST00000449818 867 ntBASIC5.18□□□□□ -1.58
CHRNA3P32297 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.18□□□□□ -1.58
CHRNA3P32297 HMGB3P14-201ENST00000494195 599 ntBASIC5.18□□□□□ -1.58
CHRNA3P32297 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.18□□□□□ -1.58
CHRNA3P32297 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHRNA3P32297 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.18□□□□□ -1.58
CHRNA3P32297 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.18□□□□□ -1.58
CHRNA3P32297 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHRNA3P32297 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CHRNA3P32297 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.18□□□□□ -1.58
CHRNA3P32297 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.18□□□□□ -1.58
CHRNA3P32297 OR1F2P-201ENST00000570470 933 ntBASIC5.18□□□□□ -1.58
CHRNA3P32297 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHRNA3P32297 BNIP3P32-201ENST00000600015 554 ntBASIC5.18□□□□□ -1.58
CHRNA3P32297 AC019131.2-201ENST00000609071 870 ntBASIC5.18□□□□□ -1.58
CHRNA3P32297 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.18□□□□□ -1.58
CHRNA3P32297 AC004948.1-201ENST00000609858 672 ntBASIC5.18□□□□□ -1.58
CHRNA3P32297 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.18□□□□□ -1.58
CHRNA3P32297 AL121890.2-201ENST00000617644 465 ntBASIC5.18□□□□□ -1.58
CHRNA3P32297 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.18□□□□□ -1.58
CHRNA3P32297 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHRNA3P32297 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CHRNA3P32297 SALL4P2-201ENST00000423288 2910 ntBASIC5.18□□□□□ -1.58
CHRNA3P32297 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.18□□□□□ -1.58
CHRNA3P32297 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.18□□□□□ -1.58
CHRNA3P32297 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHRNA3P32297 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.18□□□□□ -1.58
CHRNA3P32297 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHRNA3P32297 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.18□□□□□ -1.58
CHRNA3P32297 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHRNA3P32297 HSPA8P17-201ENST00000427029 1382 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHRNA3P32297 AL034370.1-201ENST00000397254 1590 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.17□□□□□ -1.58
CHRNA3P32297 AL133268.1-201ENST00000405676 1401 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 AC009643.2-201ENST00000603543 1448 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.17□□□□□ -1.58
CHRNA3P32297 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHRNA3P32297 AC008549.2-201ENST00000333482 706 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 RNU4-23P-201ENST00000362839 140 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 RNA5SP123-201ENST00000363244 119 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 RNU6-670P-201ENST00000364312 104 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 RNU6-1251P-201ENST00000364502 107 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CHRNA3P32297 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.17□□□□□ -1.58
CHRNA3P32297 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.17□□□□□ -1.58
CHRNA3P32297 AJ239321.1-201ENST00000424255 564 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.17□□□□□ -1.58
CHRNA3P32297 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.17□□□□□ -1.58
CHRNA3P32297 AC092162.1-201ENST00000432828 434 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.17□□□□□ -1.58
CHRNA3P32297 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.17□□□□□ -1.58
CHRNA3P32297 AC069277.2-201ENST00000454211 432 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 snoU13.20-201ENST00000459180 104 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 LARP7P4-201ENST00000481075 878 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 RN7SL244P-201ENST00000493405 297 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 AC002456.2-201ENST00000509356 380 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 BTG4P1-201ENST00000510421 183 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.17□□□□□ -1.58
CHRNA3P32297 OR7E128P-201ENST00000532736 1024 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHRNA3P32297 MIR4691-201ENST00000583764 85 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.17□□□□□ -1.58
CHRNA3P32297 SNX6P1-201ENST00000601728 1224 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 AC087783.2-201ENST00000605070 562 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 AL627230.1-201ENST00000613077 211 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 AL591926.8-201ENST00000616876 211 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 AC091905.4-201ENST00000623432 202 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 AL353662.3-201ENST00000625131 237 ntBASIC5.17□□□□□ -1.58
CHRNA3P32297 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
CHRNA3P32297 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.17□□□□□ -1.58
CHRNA3P32297 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHRNA3P32297 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.17□□□□□ -1.58
CHRNA3P32297 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.17□□□□□ -1.58
CHRNA3P32297 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHRNA3P32297 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHRNA3P32297 AC132825.1-201ENST00000463573 2247 ntBASIC5.16□□□□□ -1.58
CHRNA3P32297 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.16□□□□□ -1.58
CHRNA3P32297 UGT2B26P-201ENST00000508672 1613 ntBASIC5.16□□□□□ -1.58
CHRNA3P32297 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CHRNA3P32297 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CHRNA3P32297 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHRNA3P32297 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.16□□□□□ -1.58
CHRNA3P32297 AL359922.3-201ENST00000624779 1670 ntBASIC5.16□□□□□ -1.58
CHRNA3P32297 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.16□□□□□ -1.58
CHRNA3P32297 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms