Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.46□□□□□ -1.22
RXRBP28702 LARS-201ENST00000274562 2213 ntTSL 2 BASIC7.46□□□□□ -1.22
RXRBP28702 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.46□□□□□ -1.22
RXRBP28702 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RXRBP28702 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RXRBP28702 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RXRBP28702 AC079741.1-201ENST00000321498 212 ntBASIC7.46□□□□□ -1.22
RXRBP28702 RN7SKP6-201ENST00000364795 319 ntBASIC7.46□□□□□ -1.22
RXRBP28702 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
RXRBP28702 SNORD116-12-201ENST00000384468 92 ntBASIC7.46□□□□□ -1.22
RXRBP28702 AL593851.1-201ENST00000426171 157 ntBASIC7.46□□□□□ -1.22
RXRBP28702 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC7.46□□□□□ -1.22
RXRBP28702 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.46□□□□□ -1.22
RXRBP28702 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC7.46□□□□□ -1.22
RXRBP28702 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC7.46□□□□□ -1.22
RXRBP28702 RNF148-202ENST00000447240 839 ntTSL 2 BASIC7.46□□□□□ -1.22
RXRBP28702 AL513533.1-201ENST00000453728 415 ntBASIC7.46□□□□□ -1.22
RXRBP28702 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.46□□□□□ -1.22
RXRBP28702 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC7.46□□□□□ -1.22
RXRBP28702 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.46□□□□□ -1.22
RXRBP28702 RPL23AP40-201ENST00000487630 390 ntBASIC7.46□□□□□ -1.22
RXRBP28702 RPL23AP72-201ENST00000492447 435 ntBASIC7.46□□□□□ -1.22
RXRBP28702 CCDC11P1-201ENST00000503137 1162 ntBASIC7.46□□□□□ -1.22
RXRBP28702 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC7.46□□□□□ -1.22
RXRBP28702 AC095057.1-201ENST00000507583 168 ntBASIC7.46□□□□□ -1.22
RXRBP28702 OR7H2P-201ENST00000513483 306 ntBASIC7.46□□□□□ -1.22
RXRBP28702 RN7SKP34-201ENST00000516142 244 ntBASIC7.46□□□□□ -1.22
RXRBP28702 RN7SKP21-201ENST00000516503 220 ntBASIC7.46□□□□□ -1.22
RXRBP28702 RNU6-232P-201ENST00000517144 64 ntBASIC7.46□□□□□ -1.22
RXRBP28702 RNU6-1028P-201ENST00000517164 93 ntBASIC7.46□□□□□ -1.22
RXRBP28702 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC7.46□□□□□ -1.22
RXRBP28702 MAL2-207ENST00000522828 603 ntTSL 3 BASIC7.46□□□□□ -1.22
RXRBP28702 HMGB1P40-201ENST00000525121 540 ntBASIC7.46□□□□□ -1.22
RXRBP28702 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.46□□□□□ -1.22
RXRBP28702 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RXRBP28702 AC073916.1-201ENST00000545095 130 ntBASIC7.46□□□□□ -1.22
RXRBP28702 NOP56P3-201ENST00000549457 385 ntBASIC7.46□□□□□ -1.22
RXRBP28702 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
RXRBP28702 AC127381.1-201ENST00000555979 939 ntBASIC7.46□□□□□ -1.22
RXRBP28702 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.46□□□□□ -1.22
RXRBP28702 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC7.46□□□□□ -1.22
RXRBP28702 AC027281.1-201ENST00000574178 758 ntBASIC7.46□□□□□ -1.22
RXRBP28702 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RXRBP28702 AC107982.3-201ENST00000584957 985 ntBASIC7.46□□□□□ -1.22
RXRBP28702 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC7.46□□□□□ -1.22
RXRBP28702 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RXRBP28702 AC090527.3-201ENST00000619041 548 ntBASIC7.46□□□□□ -1.22
RXRBP28702 AC069542.2-201ENST00000624816 216 ntBASIC7.46□□□□□ -1.22
RXRBP28702 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RXRBP28702 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
RXRBP28702 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
RXRBP28702 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC7.46□□□□□ -1.22
RXRBP28702 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.46□□□□□ -1.22
RXRBP28702 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RXRBP28702 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RXRBP28702 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
RXRBP28702 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
RXRBP28702 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RXRBP28702 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
RXRBP28702 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RXRBP28702 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.45□□□□□ -1.22
RXRBP28702 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
RXRBP28702 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
RXRBP28702 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC7.45□□□□□ -1.22
RXRBP28702 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RXRBP28702 Y_RNA.88-201ENST00000363029 99 ntBASIC7.45□□□□□ -1.22
RXRBP28702 Y_RNA.516-201ENST00000384541 124 ntBASIC7.45□□□□□ -1.22
RXRBP28702 RNU1-149P-201ENST00000390870 161 ntBASIC7.45□□□□□ -1.22
RXRBP28702 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.45□□□□□ -1.22
RXRBP28702 GLULP6-201ENST00000399502 913 ntBASIC7.45□□□□□ -1.22
RXRBP28702 AL049693.1-201ENST00000402760 611 ntBASIC7.45□□□□□ -1.22
RXRBP28702 Z86062.1-201ENST00000406773 777 ntBASIC7.45□□□□□ -1.22
RXRBP28702 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC7.45□□□□□ -1.22
RXRBP28702 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.45□□□□□ -1.22
RXRBP28702 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC7.45□□□□□ -1.22
RXRBP28702 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC7.45□□□□□ -1.22
RXRBP28702 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
RXRBP28702 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
RXRBP28702 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC7.45□□□□□ -1.22
RXRBP28702 AC010424.1-201ENST00000506336 297 ntBASIC7.45□□□□□ -1.22
RXRBP28702 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC7.45□□□□□ -1.22
RXRBP28702 RNU2-30P-201ENST00000516209 141 ntBASIC7.45□□□□□ -1.22
RXRBP28702 RNU6-964P-201ENST00000516524 69 ntBASIC7.45□□□□□ -1.22
RXRBP28702 AC244502.2-201ENST00000543361 851 ntBASIC7.45□□□□□ -1.22
RXRBP28702 RBM22P1-201ENST00000578589 1214 ntBASIC7.45□□□□□ -1.22
RXRBP28702 MIR5096-201ENST00000583713 70 ntBASIC7.45□□□□□ -1.22
RXRBP28702 AC139493.1-201ENST00000604368 397 ntBASIC7.45□□□□□ -1.22
RXRBP28702 AL590392.1-201ENST00000604960 446 ntBASIC7.45□□□□□ -1.22
RXRBP28702 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC7.45□□□□□ -1.22
RXRBP28702 AC073114.1-201ENST00000612027 490 ntBASIC7.45□□□□□ -1.22
RXRBP28702 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC7.45□□□□□ -1.22
RXRBP28702 AC124312.6-202ENST00000623624 418 ntBASIC7.45□□□□□ -1.22
RXRBP28702 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.45□□□□□ -1.22
RXRBP28702 AC107980.1-201ENST00000558671 3355 ntBASIC7.45□□□□□ -1.22
RXRBP28702 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
RXRBP28702 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
RXRBP28702 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
RXRBP28702 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RXRBP28702 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RXRBP28702 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms