Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 LINC01963-201ENST00000562038 3148 ntBASIC5.07□□□□□ -1.6
LDLRP01130 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.07□□□□□ -1.6
LDLRP01130 AL592494.2-201ENST00000425455 1548 ntBASIC5.07□□□□□ -1.6
LDLRP01130 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
LDLRP01130 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
LDLRP01130 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LDLRP01130 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LDLRP01130 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.06□□□□□ -1.6
LDLRP01130 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
LDLRP01130 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.06□□□□□ -1.6
LDLRP01130 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LDLRP01130 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
LDLRP01130 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.06□□□□□ -1.6
LDLRP01130 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LDLRP01130 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
LDLRP01130 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LDLRP01130 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.06□□□□□ -1.6
LDLRP01130 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LDLRP01130 RNU1-106P-201ENST00000384382 164 ntBASIC5.06□□□□□ -1.6
LDLRP01130 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LDLRP01130 Z86062.1-201ENST00000406773 777 ntBASIC5.06□□□□□ -1.6
LDLRP01130 AL353692.2-201ENST00000407054 335 ntBASIC5.06□□□□□ -1.6
LDLRP01130 AL133325.1-201ENST00000421090 382 ntBASIC5.06□□□□□ -1.6
LDLRP01130 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.06□□□□□ -1.6
LDLRP01130 DSTNP5-201ENST00000427921 523 ntBASIC5.06□□□□□ -1.6
LDLRP01130 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.06□□□□□ -1.6
LDLRP01130 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.06□□□□□ -1.6
LDLRP01130 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.06□□□□□ -1.6
LDLRP01130 AC046176.1-201ENST00000435260 1170 ntBASIC5.06□□□□□ -1.6
LDLRP01130 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.06□□□□□ -1.6
LDLRP01130 AL138787.1-202ENST00000437804 898 ntBASIC5.06□□□□□ -1.6
LDLRP01130 AC006335.2-201ENST00000437993 330 ntBASIC5.06□□□□□ -1.6
LDLRP01130 GSTA7P-201ENST00000438425 448 ntBASIC5.06□□□□□ -1.6
LDLRP01130 AC006326.1-201ENST00000445465 787 ntBASIC5.06□□□□□ -1.6
LDLRP01130 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.06□□□□□ -1.6
LDLRP01130 AC006463.2-201ENST00000473326 348 ntBASIC5.06□□□□□ -1.6
LDLRP01130 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.06□□□□□ -1.6
LDLRP01130 AC093267.1-201ENST00000489176 961 ntBASIC5.06□□□□□ -1.6
LDLRP01130 AC022133.1-201ENST00000490961 571 ntBASIC5.06□□□□□ -1.6
LDLRP01130 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.06□□□□□ -1.6
LDLRP01130 AL671862.1-201ENST00000515851 349 ntBASIC5.06□□□□□ -1.6
LDLRP01130 RN7SKP157-201ENST00000516174 282 ntBASIC5.06□□□□□ -1.6
LDLRP01130 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
LDLRP01130 AC022360.1-201ENST00000521058 340 ntBASIC5.06□□□□□ -1.6
LDLRP01130 MTND1P6-201ENST00000523621 946 ntBASIC5.06□□□□□ -1.6
LDLRP01130 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LDLRP01130 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.06□□□□□ -1.6
LDLRP01130 AC126177.5-201ENST00000549599 178 ntBASIC5.06□□□□□ -1.6
LDLRP01130 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.06□□□□□ -1.6
LDLRP01130 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.06□□□□□ -1.6
LDLRP01130 AC106785.3-201ENST00000564064 847 ntBASIC5.06□□□□□ -1.6
LDLRP01130 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
LDLRP01130 ZNF92P2-201ENST00000600543 1059 ntBASIC5.06□□□□□ -1.6
LDLRP01130 CLIC4P2-201ENST00000601934 717 ntBASIC5.06□□□□□ -1.6
LDLRP01130 AP000769.2-201ENST00000602344 396 ntBASIC5.06□□□□□ -1.6
LDLRP01130 AL096803.3-201ENST00000609032 532 ntBASIC5.06□□□□□ -1.6
LDLRP01130 AL121890.2-201ENST00000617644 465 ntBASIC5.06□□□□□ -1.6
LDLRP01130 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.06□□□□□ -1.6
LDLRP01130 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.06□□□□□ -1.6
LDLRP01130 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LDLRP01130 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LDLRP01130 AC083843.2-201ENST00000568248 6253 ntBASIC5.06□□□□□ -1.6
LDLRP01130 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.06□□□□□ -1.6
LDLRP01130 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.06□□□□□ -1.6
LDLRP01130 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
LDLRP01130 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LDLRP01130 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LDLRP01130 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.05□□□□□ -1.6
LDLRP01130 AC026951.1-201ENST00000559530 2459 ntBASIC5.05□□□□□ -1.6
LDLRP01130 AL731566.1-201ENST00000620490 1937 ntBASIC5.05□□□□□ -1.6
LDLRP01130 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.05□□□□□ -1.6
LDLRP01130 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.05□□□□□ -1.6
LDLRP01130 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LDLRP01130 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
LDLRP01130 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.05□□□□□ -1.6
LDLRP01130 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LDLRP01130 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LDLRP01130 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.05□□□□□ -1.6
LDLRP01130 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LDLRP01130 AC233289.1-201ENST00000403700 508 ntBASIC5.05□□□□□ -1.6
LDLRP01130 SNORA11-201ENST00000408789 128 ntBASIC5.05□□□□□ -1.6
LDLRP01130 AL390774.1-201ENST00000411924 246 ntBASIC5.05□□□□□ -1.6
LDLRP01130 AC007738.1-201ENST00000413892 348 ntBASIC5.05□□□□□ -1.6
LDLRP01130 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.05□□□□□ -1.6
LDLRP01130 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LDLRP01130 AC124944.2-201ENST00000429866 1242 ntBASIC5.05□□□□□ -1.6
LDLRP01130 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LDLRP01130 PA2G4P6-201ENST00000438325 1197 ntBASIC5.05□□□□□ -1.6
LDLRP01130 RPS11P7-201ENST00000442125 465 ntBASIC5.05□□□□□ -1.6
LDLRP01130 AL591363.1-201ENST00000450091 483 ntBASIC5.05□□□□□ -1.6
LDLRP01130 MTND2P6-201ENST00000455337 1030 ntBASIC5.05□□□□□ -1.6
LDLRP01130 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.05□□□□□ -1.6
LDLRP01130 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.05□□□□□ -1.6
LDLRP01130 HAUS1P1-201ENST00000505275 832 ntBASIC5.05□□□□□ -1.6
LDLRP01130 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LDLRP01130 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.05□□□□□ -1.6
LDLRP01130 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.05□□□□□ -1.6
LDLRP01130 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.05□□□□□ -1.6
LDLRP01130 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.05□□□□□ -1.6
LDLRP01130 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms