Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 MIR93-201ENST00000385024 80 ntBASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 AL031985.1-201ENST00000392713 418 ntBASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 NCSTNP1-201ENST00000406229 144 ntBASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 AL590609.2-201ENST00000421430 368 ntBASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 RPL34P3-201ENST00000421454 338 ntBASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 RCC2P2-201ENST00000422174 918 ntBASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 RPL23AP19-201ENST00000436229 369 ntBASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 AC073109.1-201ENST00000445066 978 ntBASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 AC069277.2-201ENST00000454211 432 ntBASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 AL133372.1-201ENST00000493565 745 ntBASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 SNORD116-30-201ENST00000516468 85 ntBASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 RNA5SP373-201ENST00000517271 95 ntBASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 AC026688.1-201ENST00000520639 1168 ntBASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 IGLV3-26-201ENST00000520756 302 ntBASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 AC012339.2-201ENST00000523996 453 ntBASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 GNG2-208ENST00000554875 430 ntTSL 5 BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 AC008759.1-201ENST00000589783 983 ntBASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 RPL27-207ENST00000590864 569 ntTSL 2 BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 AC008638.3-201ENST00000603341 463 ntBASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 AL049794.2-201ENST00000616301 365 ntBASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RBFOX3A6NFN3 BX005019.1-201ENST00000561881 1810 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AC027290.2-201ENST00000623210 18662 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 RHOT1P2-201ENST00000366423 333 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 SNORA70.10-201ENST00000384515 134 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AC092642.1-201ENST00000392417 425 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 EIF4A1P7-201ENST00000421800 1220 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 Z74021.1-201ENST00000423610 407 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AL662874.1-201ENST00000426065 230 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 PRPF38AP2-201ENST00000438179 851 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 RPS29P9-201ENST00000440360 171 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AL161636.2-201ENST00000445179 927 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AC018638.3-201ENST00000461273 132 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 PPIAP19-201ENST00000486414 492 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 UBA52P3-201ENST00000491303 382 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 NRBF2P4-201ENST00000520874 850 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 NPM1P6-201ENST00000521088 871 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AC022616.2-201ENST00000523185 300 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AP005119.2-201ENST00000579735 1105 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AC209154.1-201ENST00000582156 337 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 OR1AB1P-201ENST00000585564 761 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AC005377.1-201ENST00000605126 456 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AC007620.3-201ENST00000608131 497 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 AC015722.2-201ENST00000622210 551 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 MIR4302-201ENST00000638058 60 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 MIR193BHG-214ENST00000641765 509 ntBASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RBFOX3A6NFN3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 MIR133B-201ENST00000362210 119 ntBASIC3.8□□□□□ -1.8
RBFOX3A6NFN3 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms