Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 QTRT1P1-201ENST00000604344 1078 ntBASIC5.31□□□□□ -1.56
RAI2Q9Y5P3 AC011626.1-201ENST00000604710 562 ntBASIC5.31□□□□□ -1.56
RAI2Q9Y5P3 AC013244.3-201ENST00000605614 388 ntBASIC5.31□□□□□ -1.56
RAI2Q9Y5P3 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.31□□□□□ -1.56
RAI2Q9Y5P3 MIR8084-201ENST00000614105 89 ntBASIC5.31□□□□□ -1.56
RAI2Q9Y5P3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAI2Q9Y5P3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAI2Q9Y5P3 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.31□□□□□ -1.56
RAI2Q9Y5P3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RAI2Q9Y5P3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAI2Q9Y5P3 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RAI2Q9Y5P3 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.31□□□□□ -1.56
RAI2Q9Y5P3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 RNU1-32P-201ENST00000363937 159 ntBASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 MIR589-201ENST00000385238 99 ntBASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 RN7SKP199-201ENST00000410325 305 ntBASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 RPS3AP25-201ENST00000411660 793 ntBASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 AL024507.1-201ENST00000412741 274 ntBASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 AL360081.1-201ENST00000428299 555 ntBASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 AC007563.3-201ENST00000433233 371 ntBASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 NPM1P29-201ENST00000483112 803 ntBASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 RN7SL604P-201ENST00000492589 296 ntBASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 RNU5A-7P-201ENST00000515979 116 ntBASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 AC012400.1-201ENST00000518452 381 ntBASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 AC104115.2-201ENST00000523026 687 ntBASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 MTND1P24-201ENST00000552175 861 ntBASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 AC063949.1-201ENST00000552900 865 ntBASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 AC008814.1-201ENST00000603797 406 ntBASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 AC008759.3-201ENST00000613300 508 ntBASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 AC090527.3-201ENST00000619041 548 ntBASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 AL133370.2-201ENST00000619934 439 ntBASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 LINC01739-205ENST00000641890 573 ntBASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.3□□□□□ -1.56
RAI2Q9Y5P3 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 AC093671.1-201ENST00000624981 2929 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 U3.3-201ENST00000362986 216 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 RNU1-43P-201ENST00000365052 165 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 RN7SKP186-201ENST00000365371 303 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 RNU6-1257P-201ENST00000384625 110 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 SNORA48.4-201ENST00000391089 134 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 OR8V1P-201ENST00000395193 873 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 Z86062.1-201ENST00000406773 777 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 DUTP5-201ENST00000406790 469 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 ARL2BPP3-201ENST00000421226 480 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 AC104837.2-201ENST00000427236 424 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 AC016712.1-201ENST00000431088 378 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 AL161722.2-201ENST00000434731 981 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 AL389915.2-201ENST00000454576 441 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 AC091180.1-201ENST00000462104 372 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 RPL32P14-201ENST00000463196 378 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 RN7SL189P-201ENST00000468631 289 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 RN7SL459P-201ENST00000481078 302 ntBASIC5.29□□□□□ -1.56
RAI2Q9Y5P3 RN7SL814P-201ENST00000487715 300 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms