Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AP000346.3-201ENST00000622821 210 ntBASIC5.06□□□□□ -1.6
PCDHGA1Q9Y5H4 AC015908.5-201ENST00000623289 343 ntBASIC5.06□□□□□ -1.6
PCDHGA1Q9Y5H4 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGA1Q9Y5H4 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.06□□□□□ -1.6
PCDHGA1Q9Y5H4 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGA1Q9Y5H4 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGA1Q9Y5H4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.06□□□□□ -1.6
PCDHGA1Q9Y5H4 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA1Q9Y5H4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PCDHGA1Q9Y5H4 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA1Q9Y5H4 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHGA1Q9Y5H4 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PCDHGA1Q9Y5H4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA1Q9Y5H4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA1Q9Y5H4 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGA1Q9Y5H4 AC114774.1-201ENST00000507410 1770 ntBASIC5.06□□□□□ -1.6
PCDHGA1Q9Y5H4 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA1Q9Y5H4 AC009962.1-201ENST00000567327 3813 ntBASIC5.06□□□□□ -1.6
PCDHGA1Q9Y5H4 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA1Q9Y5H4 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
PCDHGA1Q9Y5H4 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 RNU1-32P-201ENST00000363937 159 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 RNA5SP455-201ENST00000365190 119 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AL121878.1-201ENST00000418638 859 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 RPS27AP6-201ENST00000427962 448 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AC091390.1-201ENST00000433904 331 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 GAPDHP14-201ENST00000450472 937 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 RPS4XP12-201ENST00000461747 709 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AL672167.3-201ENST00000465951 960 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 NDUFA5P9-201ENST00000472609 340 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AP000797.2-201ENST00000475768 606 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AC025181.1-201ENST00000477507 416 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 NPM1P29-201ENST00000483112 803 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 RN7SL244P-201ENST00000493405 297 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AC140172.1-201ENST00000502928 141 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 PRELID3BP5-201ENST00000508612 460 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AC093770.1-201ENST00000511559 571 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AC111000.6-201ENST00000514471 709 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 MIR4691-201ENST00000583764 85 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AL354696.1-201ENST00000614652 497 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 MIR6780A-201ENST00000615089 68 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AC003001.2-201ENST00000616294 831 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 OR5AC4P-202ENST00000642086 985 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AC068870.1-201ENST00000563737 2455 ntBASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA1Q9Y5H4 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 AL022311.1-201ENST00000623726 19416 ntBASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 AC009229.4-201ENST00000623854 1947 ntBASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 RNU6-398P-201ENST00000384143 109 ntBASIC5.04□□□□□ -1.6
PCDHGA1Q9Y5H4 RNU4-31P-201ENST00000384211 141 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms