Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RNGTTP1-201ENST00000420965 728 ntBASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 VN1R42P-201ENST00000424651 344 ntBASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 FAM96AP1-201ENST00000430879 482 ntBASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 ARF4P4-201ENST00000439608 520 ntBASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 ATP5C1P1-201ENST00000441945 895 ntBASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 AURKAPS1-201ENST00000451805 1212 ntBASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 RN7SL515P-201ENST00000463999 297 ntBASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 CYCSP20-201ENST00000473154 315 ntBASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 AC008410.1-201ENST00000483777 339 ntBASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 TPT1P3-201ENST00000492841 512 ntBASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 AC024558.1-201ENST00000505008 528 ntBASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 SCARNA16.4-201ENST00000516956 187 ntBASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 EIF4A2P5-201ENST00000529914 499 ntBASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 OR7E128P-201ENST00000532736 1024 ntBASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 AC025918.2-201ENST00000558683 763 ntBASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 AC000068.2-201ENST00000608816 460 ntBASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 AL035461.2-201ENST00000619201 524 ntBASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 AC019072.1-201ENST00000604535 1551 ntBASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 MFSD8-213ENST00000641134 1327 ntBASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CTDP1Q9Y5B0 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 RN7SKP97-201ENST00000410966 333 ntBASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AC009518.2-201ENST00000418056 731 ntBASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AC093422.3-201ENST00000428506 305 ntBASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AC096638.2-201ENST00000434965 711 ntBASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AC073410.1-201ENST00000435125 589 ntBASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AC245517.2-201ENST00000442890 346 ntBASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AC105399.1-202ENST00000447303 205 ntBASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 HSPE1P22-201ENST00000456856 327 ntBASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 CBX1P5-201ENST00000475330 559 ntBASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AC010374.1-201ENST00000503762 1237 ntBASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AC147055.3-201ENST00000510547 851 ntBASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 RNU6-319P-201ENST00000516025 108 ntBASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 VN1R78P-201ENST00000597393 564 ntBASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AC073387.2-201ENST00000604797 784 ntBASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AL139344.1-201ENST00000605228 195 ntBASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AL121612.2-201ENST00000612261 482 ntBASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AC016769.4-201ENST00000616893 535 ntBASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AC074101.1-201ENST00000637861 241 ntBASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 STX3-208ENST00000641815 3236 ntBASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 AC004656.1-201ENST00000568479 4951 ntBASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CTDP1Q9Y5B0 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AC005294.1-201ENST00000355509 281 ntBASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 RNU6-207P-201ENST00000384137 107 ntBASIC6.4□□□□□ -1.38
CTDP1Q9Y5B0 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms