Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 IGLV2-28-201ENST00000520681 304 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AL049779.3-201ENST00000557141 606 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC124856.1-201ENST00000600819 896 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC013244.3-201ENST00000605614 388 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC008115.3-201ENST00000614874 549 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 MIR6719-201ENST00000622428 87 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC004232.3-201ENST00000622977 525 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC090506.2-201ENST00000624521 419 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRFN1Q9P244 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC119744.1-201ENST00000454746 1715 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LRFN1Q9P244 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC009229.4-201ENST00000623854 1947 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRFN1Q9P244 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRFN1Q9P244 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRFN1Q9P244 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC134882.1-201ENST00000603738 1676 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRFN1Q9P244 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LRFN1Q9P244 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AL118496.1-201ENST00000440201 1812 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC025470.1-201ENST00000510053 2032 ntBASIC5.3□□□□□ -1.56
LRFN1Q9P244 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LRFN1Q9P244 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.29□□□□□ -1.56
LRFN1Q9P244 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LRFN1Q9P244 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LRFN1Q9P244 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.29□□□□□ -1.56
LRFN1Q9P244 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LRFN1Q9P244 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LRFN1Q9P244 AL355834.1-201ENST00000556602 3965 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 SAMMSON-213ENST00000641336 1521 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LRFN1Q9P244 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
LRFN1Q9P244 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LRFN1Q9P244 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.29□□□□□ -1.56
LRFN1Q9P244 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LRFN1Q9P244 SNORA51.12-201ENST00000384448 134 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 NCSTNP1-201ENST00000406229 144 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.29□□□□□ -1.56
LRFN1Q9P244 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LRFN1Q9P244 RNU2-65P-201ENST00000410162 185 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.29□□□□□ -1.56
LRFN1Q9P244 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.29□□□□□ -1.56
LRFN1Q9P244 AC009965.2-201ENST00000425328 970 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 C1DP1-201ENST00000426049 402 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.29□□□□□ -1.56
LRFN1Q9P244 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.29□□□□□ -1.56
LRFN1Q9P244 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.29□□□□□ -1.56
LRFN1Q9P244 USP9YP24-201ENST00000434374 697 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 AC234064.1-201ENST00000436312 247 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.29□□□□□ -1.56
LRFN1Q9P244 UBE2V1P5-201ENST00000440070 405 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 TXNP5-201ENST00000441043 315 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.29□□□□□ -1.56
LRFN1Q9P244 USP9YP17-201ENST00000444617 696 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 OFD1P3Y-201ENST00000453312 783 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 MRPL35P4-201ENST00000453682 566 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.29□□□□□ -1.56
LRFN1Q9P244 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.29□□□□□ -1.56
LRFN1Q9P244 AC090602.1-201ENST00000469695 252 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 AC087672.1-201ENST00000479876 766 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LRFN1Q9P244 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.29□□□□□ -1.56
LRFN1Q9P244 AC074255.1-201ENST00000511259 501 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.29□□□□□ -1.56
LRFN1Q9P244 AC008494.2-201ENST00000514544 370 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 snoZ278.1-201ENST00000517059 112 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 AC139365.2-201ENST00000517972 253 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.29□□□□□ -1.56
LRFN1Q9P244 MTCO3P15-201ENST00000526563 574 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 OR8K4P-201ENST00000534608 872 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 AC139103.1-201ENST00000534696 1030 ntBASIC5.29□□□□□ -1.56
LRFN1Q9P244 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.29□□□□□ -1.56
LRFN1Q9P244 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.29□□□□□ -1.56
LRFN1Q9P244 AC084824.2-201ENST00000548906 345 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms