Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 OR2AH1P-201ENST00000425717 928 ntBASIC5.22□□□□□ -1.57
PCDH9Q9HC56 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 Z99127.2-201ENST00000441426 334 ntBASIC5.22□□□□□ -1.57
PCDH9Q9HC56 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 RNA5SP92-201ENST00000516437 110 ntBASIC5.22□□□□□ -1.57
PCDH9Q9HC56 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 BNIP3P40-201ENST00000596017 556 ntBASIC5.22□□□□□ -1.57
PCDH9Q9HC56 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 AC022960.3-201ENST00000619794 441 ntBASIC5.22□□□□□ -1.57
PCDH9Q9HC56 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 STX3-208ENST00000641815 3236 ntBASIC5.22□□□□□ -1.57
PCDH9Q9HC56 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDH9Q9HC56 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.21□□□□□ -1.57
PCDH9Q9HC56 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PCDH9Q9HC56 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
PCDH9Q9HC56 AL731566.1-201ENST00000620490 1937 ntBASIC5.21□□□□□ -1.57
PCDH9Q9HC56 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 HSPA8P14-201ENST00000552265 1805 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 CR788268.1-201ENST00000603931 1809 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 AL603750.1-201ENST00000624216 1717 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 AC069282.1-201ENST00000411911 526 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 MTCO2P1-201ENST00000424648 477 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 PTP4A1P3-201ENST00000433661 420 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 AC006326.1-201ENST00000445465 787 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 AC239798.3-201ENST00000454459 408 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 AC093166.2-201ENST00000455969 1017 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 FCF1P6-201ENST00000456841 595 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 RN7SL443P-201ENST00000464331 290 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 RPS18P6-201ENST00000476880 458 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 STRADBP1-201ENST00000478954 1281 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 RPL23AP73-201ENST00000492507 471 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 SNRPCP2-201ENST00000504370 475 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 ENPP7P9-201ENST00000514456 627 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 MTATP6P9-201ENST00000515039 680 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 SCARNA21.2-201ENST00000516600 166 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 AC027308.1-201ENST00000517993 110 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 IGLV2-28-201ENST00000520681 304 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 OR11J2P-201ENST00000555298 907 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 MIR3936-201ENST00000584304 110 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 RN7SL435P-201ENST00000584418 282 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 MTATP6P2-201ENST00000603319 678 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 AC099494.2-201ENST00000623371 978 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 RARSP1-201ENST00000542842 1418 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 SCARNA15-201ENST00000607520 4325 ntBASIC5.21□□□□□ -1.58
PCDH9Q9HC56 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH9Q9HC56 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH9Q9HC56 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms