Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC239798.3-201ENST00000454459 408 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 NECAP1P2-201ENST00000455668 727 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 RNU7-140P-201ENST00000459546 60 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC026348.1-201ENST00000462549 1053 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 RAP1BP2-201ENST00000478270 544 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 RPF2P2-201ENST00000504693 896 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 SNORA70.11-201ENST00000515987 138 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 SNORA70.13-201ENST00000516116 138 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 SEPT10P1-201ENST00000517342 1162 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 IGHV3-63-201ENST00000518422 341 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC008015.1-201ENST00000555505 465 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 CYCSP38-201ENST00000559840 322 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC095057.3-201ENST00000567102 1157 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 NBR2-204ENST00000587322 63 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AL583832.1-201ENST00000603227 784 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 VN1R74P-201ENST00000613259 503 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC090116.1-201ENST00000615679 446 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC109454.4-201ENST00000623411 649 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AL354854.1-201ENST00000455940 1363 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC093225.1-201ENST00000506867 1408 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 MAPK10-338ENST00000641647 3362 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC053481.2-202ENST00000582394 1500 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC026523.2-201ENST00000625039 7739 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 RNU6-413P-201ENST00000384115 107 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 MIR130B-202ENST00000385018 82 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 TAF13P2-201ENST00000416876 286 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 RNGTTP1-201ENST00000420965 728 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 USP9YP26-201ENST00000421008 661 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 CHEK2P5-201ENST00000423877 246 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 MTND4P20-201ENST00000424125 869 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 RPF2P1-201ENST00000424137 906 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC009784.1-201ENST00000426484 460 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 VN1R21P-201ENST00000426703 765 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 RPP40P1-201ENST00000426762 456 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AL136231.1-201ENST00000429407 730 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 COX7BP2-201ENST00000437976 242 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AL353662.1-201ENST00000439099 327 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 FGF7P5-201ENST00000441829 291 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 BMS1P10-201ENST00000443754 1120 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 NPM1P13-201ENST00000452663 865 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 RPS3AP43-201ENST00000479743 781 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 PPIAP19-201ENST00000486414 492 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC105384.2-201ENST00000508433 640 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC113347.3-201ENST00000509113 148 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 Y_RNA.655-201ENST00000515919 96 ntBASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.36□□□□□ -1.55
AMBRA1Q9C0C7 HMGN2P47-201ENST00000559378 272 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 240.5 ms