Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 MIR105-1-201ENST00000385222 81 ntBASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 AC099670.2-201ENST00000435130 321 ntBASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 NOP56P3-201ENST00000549457 385 ntBASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 AC011447.4-201ENST00000587562 111 ntBASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 ABI1P1-201ENST00000603375 1120 ntBASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 AC007786.3-201ENST00000615154 596 ntBASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 MIR6133-201ENST00000617057 108 ntBASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 AC022031.1-201ENST00000585985 2593 ntBASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.82□□□□□ -1.32
CHMP4AQ9BY43 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 USP9YP4-201ENST00000424401 1745 ntBASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 AC011493.1-201ENST00000596753 1632 ntBASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 RNU6-40P-201ENST00000384254 107 ntBASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 HMGB1P13-201ENST00000406019 642 ntBASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 AC005033.1-201ENST00000428904 813 ntBASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 BX276092.6-201ENST00000430476 250 ntBASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 AC006326.1-201ENST00000445465 787 ntBASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 MTND2P8-201ENST00000450555 1025 ntBASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 BX276092.8-201ENST00000455722 250 ntBASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 CABYRP1-201ENST00000465493 1045 ntBASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 RN7SL799P-201ENST00000475891 298 ntBASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 RN7SL727P-201ENST00000482164 296 ntBASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 RPS4XP1-201ENST00000482189 787 ntBASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 RNA5SP373-201ENST00000517271 95 ntBASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 AC009852.2-201ENST00000567898 485 ntBASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 AC115621.1-201ENST00000604653 858 ntBASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 AC010435.1-201ENST00000623353 1177 ntBASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 AC009501.3-201ENST00000605001 1352 ntBASIC6.81□□□□□ -1.32
CHMP4AQ9BY43 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.8□□□□□ -1.32
CHMP4AQ9BY43 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CHMP4AQ9BY43 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.8□□□□□ -1.32
CHMP4AQ9BY43 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
CHMP4AQ9BY43 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHMP4AQ9BY43 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CHMP4AQ9BY43 AL133268.1-201ENST00000405676 1401 ntBASIC6.8□□□□□ -1.32
CHMP4AQ9BY43 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.8□□□□□ -1.32
CHMP4AQ9BY43 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CHMP4AQ9BY43 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.8□□□□□ -1.32
CHMP4AQ9BY43 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.8□□□□□ -1.32
CHMP4AQ9BY43 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.8□□□□□ -1.32
CHMP4AQ9BY43 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC6.8□□□□□ -1.32
CHMP4AQ9BY43 AL035458.1-201ENST00000433096 585 ntBASIC6.8□□□□□ -1.32
CHMP4AQ9BY43 AC245047.2-201ENST00000441060 530 ntBASIC6.8□□□□□ -1.32
CHMP4AQ9BY43 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.8□□□□□ -1.32
CHMP4AQ9BY43 FAR2P1-206ENST00000449736 709 ntBASIC6.8□□□□□ -1.32
CHMP4AQ9BY43 CBX1P5-201ENST00000475330 559 ntBASIC6.8□□□□□ -1.32
CHMP4AQ9BY43 AC023050.1-201ENST00000498198 304 ntBASIC6.8□□□□□ -1.32
CHMP4AQ9BY43 SEPT10P1-201ENST00000517342 1162 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms