Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC131009.3-201ENST00000621809 287 ntBASIC7.25□□□□□ -1.25
TRAIPQ9BWF2 AC073862.4-201ENST00000622982 854 ntBASIC7.25□□□□□ -1.25
TRAIPQ9BWF2 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC7.25□□□□□ -1.25
TRAIPQ9BWF2 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
TRAIPQ9BWF2 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.25□□□□□ -1.25
TRAIPQ9BWF2 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
TRAIPQ9BWF2 AC092724.1-201ENST00000624623 3397 ntBASIC7.25□□□□□ -1.25
TRAIPQ9BWF2 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
TRAIPQ9BWF2 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.25□□□□□ -1.25
TRAIPQ9BWF2 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.25□□□□□ -1.25
TRAIPQ9BWF2 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.25□□□□□ -1.25
TRAIPQ9BWF2 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
TRAIPQ9BWF2 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
TRAIPQ9BWF2 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
TRAIPQ9BWF2 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.25□□□□□ -1.25
TRAIPQ9BWF2 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 FUNDC2P3-201ENST00000334716 533 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 RNU6-921P-201ENST00000384361 107 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 AL050335.1-201ENST00000396909 869 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 PRELID1P1-201ENST00000403549 660 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 GLS-204ENST00000409428 816 ntTSL 2 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 AL663109.1-201ENST00000411498 844 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 TRAPPC2P10-201ENST00000415662 323 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 AC006366.1-201ENST00000422002 759 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 CENPIP1-201ENST00000425713 902 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 SNRPEP7-201ENST00000438350 220 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 VN1R110P-201ENST00000438988 971 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 RAD51AP1P1-201ENST00000484195 1001 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 FTH1P24-201ENST00000503502 462 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 HMGN1P16-201ENST00000508308 283 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 SCARNA5-201ENST00000516201 276 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 PSMB7P1-201ENST00000556349 514 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 AC027243.2-201ENST00000602530 724 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 SNORD96A-201ENST00000606577 79 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 AL159169.3-201ENST00000608871 561 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 AL359535.1-201ENST00000612100 1087 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 AP000577.1-201ENST00000624366 878 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 AC111152.1-202ENST00000635848 339 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 MAPK6PS2-201ENST00000379571 2060 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 AC011933.2-201ENST00000578539 2790 ntBASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
TRAIPQ9BWF2 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
TRAIPQ9BWF2 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRAIPQ9BWF2 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC7.23□□□□□ -1.25
TRAIPQ9BWF2 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
TRAIPQ9BWF2 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRAIPQ9BWF2 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
TRAIPQ9BWF2 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC7.23□□□□□ -1.25
TRAIPQ9BWF2 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
TRAIPQ9BWF2 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
TRAIPQ9BWF2 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
TRAIPQ9BWF2 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
TRAIPQ9BWF2 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.23□□□□□ -1.25
TRAIPQ9BWF2 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC7.23□□□□□ -1.25
TRAIPQ9BWF2 ZYG11AP1-201ENST00000430329 837 ntBASIC7.23□□□□□ -1.25
TRAIPQ9BWF2 AL353597.2-202ENST00000434901 373 ntBASIC7.23□□□□□ -1.25
TRAIPQ9BWF2 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC7.23□□□□□ -1.25
TRAIPQ9BWF2 EEF1B2P3-201ENST00000447718 678 ntBASIC7.23□□□□□ -1.25
TRAIPQ9BWF2 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms