Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC107027.3-201ENST00000565095 3473 ntBASIC5.06□□□□□ -1.6
RPRD1AQ96P16 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 MTCO1P22-201ENST00000604619 1360 ntBASIC5.05□□□□□ -1.6
RPRD1AQ96P16 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 MAPK10-263ENST00000641052 4307 ntBASIC5.05□□□□□ -1.6
RPRD1AQ96P16 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 AC013442.1-201ENST00000397347 228 ntBASIC5.05□□□□□ -1.6
RPRD1AQ96P16 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 RPL34P6-201ENST00000432390 345 ntBASIC5.05□□□□□ -1.6
RPRD1AQ96P16 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 AC234781.3-201ENST00000452540 973 ntBASIC5.05□□□□□ -1.6
RPRD1AQ96P16 RPL23AP56-201ENST00000460778 453 ntBASIC5.05□□□□□ -1.6
RPRD1AQ96P16 NIP7P2-201ENST00000485801 544 ntBASIC5.05□□□□□ -1.6
RPRD1AQ96P16 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 BGLT3-201ENST00000564523 994 ntBASIC5.05□□□□□ -1.6
RPRD1AQ96P16 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 AC008536.1-201ENST00000602872 669 ntBASIC5.05□□□□□ -1.6
RPRD1AQ96P16 FAM25E-202ENST00000608562 189 ntBASIC5.05□□□□□ -1.6
RPRD1AQ96P16 BX005214.3-202ENST00000619809 325 ntBASIC5.05□□□□□ -1.6
RPRD1AQ96P16 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 AP001784.1-201ENST00000624107 428 ntBASIC5.05□□□□□ -1.6
RPRD1AQ96P16 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 AC120338.1-201ENST00000625074 1541 ntBASIC5.05□□□□□ -1.6
RPRD1AQ96P16 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RPRD1AQ96P16 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 ZNF652P1-201ENST00000442420 1309 ntBASIC5.04□□□□□ -1.6
RPRD1AQ96P16 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 SNORA11B-201ENST00000408175 129 ntBASIC5.04□□□□□ -1.6
RPRD1AQ96P16 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 AC007738.1-201ENST00000413892 348 ntBASIC5.04□□□□□ -1.6
RPRD1AQ96P16 AL139128.1-201ENST00000413921 941 ntBASIC5.04□□□□□ -1.6
RPRD1AQ96P16 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 AC000111.2-201ENST00000448200 210 ntBASIC5.04□□□□□ -1.6
RPRD1AQ96P16 AC091685.2-201ENST00000454924 864 ntBASIC5.04□□□□□ -1.6
RPRD1AQ96P16 HSPE1P22-201ENST00000456856 327 ntBASIC5.04□□□□□ -1.6
RPRD1AQ96P16 AC063943.1-201ENST00000465434 453 ntBASIC5.04□□□□□ -1.6
RPRD1AQ96P16 AC073073.1-201ENST00000493920 463 ntBASIC5.04□□□□□ -1.6
RPRD1AQ96P16 RNU4-18P-201ENST00000516751 149 ntBASIC5.04□□□□□ -1.6
RPRD1AQ96P16 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 AP000919.1-201ENST00000582850 985 ntBASIC5.04□□□□□ -1.6
RPRD1AQ96P16 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 AC004948.1-201ENST00000609858 672 ntBASIC5.04□□□□□ -1.6
RPRD1AQ96P16 AP005212.4-201ENST00000614206 710 ntBASIC5.04□□□□□ -1.6
RPRD1AQ96P16 AC091953.3-201ENST00000623220 236 ntBASIC5.04□□□□□ -1.6
RPRD1AQ96P16 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 AC008758.3-201ENST00000507003 1829 ntBASIC5.04□□□□□ -1.6
RPRD1AQ96P16 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.04□□□□□ -1.6
RPRD1AQ96P16 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RPRD1AQ96P16 AC132825.1-201ENST00000463573 2247 ntBASIC5.03□□□□□ -1.6
RPRD1AQ96P16 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms