Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AC079315.1-201ENST00000602952 623 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AC009597.2-201ENST00000604659 592 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AC018618.2-201ENST00000604770 446 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AL023583.1-201ENST00000607518 1143 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AL445493.3-201ENST00000619568 477 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AC011815.3-201ENST00000624194 473 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AC073869.10-201ENST00000642016 354 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AC090971.4-201ENST00000560291 1800 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 AC006210.2-201ENST00000367074 1545 ntBASIC5.01□□□□□ -1.61
VPS33AQ96AX1 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS33AQ96AX1 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5□□□□□ -1.61
VPS33AQ96AX1 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5□□□□□ -1.61
VPS33AQ96AX1 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS33AQ96AX1 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS33AQ96AX1 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5□□□□□ -1.61
VPS33AQ96AX1 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5□□□□□ -1.61
VPS33AQ96AX1 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS33AQ96AX1 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
VPS33AQ96AX1 RNA5SP46-201ENST00000362370 120 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS33AQ96AX1 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5□□□□□ -1.61
VPS33AQ96AX1 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5□□□□□ -1.61
VPS33AQ96AX1 AL359643.1-201ENST00000404109 423 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 OR2AT2P-201ENST00000413438 905 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 AL121882.1-201ENST00000422893 417 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 MTND6P12-201ENST00000428247 522 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5□□□□□ -1.61
VPS33AQ96AX1 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5□□□□□ -1.61
VPS33AQ96AX1 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5□□□□□ -1.61
VPS33AQ96AX1 AL590762.3-201ENST00000436372 640 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 CBX1P4-201ENST00000439415 457 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 AL353093.1-201ENST00000441292 436 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5□□□□□ -1.61
VPS33AQ96AX1 AC069540.1-201ENST00000446320 988 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 GAPDHP25-201ENST00000447061 1001 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5□□□□□ -1.61
VPS33AQ96AX1 BX842559.2-201ENST00000451418 605 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 AC079168.1-201ENST00000458741 345 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5□□□□□ -1.61
VPS33AQ96AX1 AC111193.1-201ENST00000504097 155 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5□□□□□ -1.61
VPS33AQ96AX1 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5□□□□□ -1.61
VPS33AQ96AX1 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5□□□□□ -1.61
VPS33AQ96AX1 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5□□□□□ -1.61
VPS33AQ96AX1 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS33AQ96AX1 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5□□□□□ -1.61
VPS33AQ96AX1 YWHABP2-201ENST00000540201 713 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5□□□□□ -1.61
VPS33AQ96AX1 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5□□□□□ -1.61
VPS33AQ96AX1 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
VPS33AQ96AX1 VN1R84P-201ENST00000593697 235 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 ZNF92P3-201ENST00000596594 954 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5□□□□□ -1.61
VPS33AQ96AX1 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5□□□□□ -1.61
VPS33AQ96AX1 AF230666.2-201ENST00000602328 725 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 AC079880.2-201ENST00000603790 1213 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 AC005252.1-201ENST00000604518 1063 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 AC243654.2-201ENST00000612843 443 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 AC244100.4-201ENST00000617747 388 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 BX005214.3-202ENST00000619809 325 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5□□□□□ -1.61
VPS33AQ96AX1 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
VPS33AQ96AX1 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS33AQ96AX1 AL512283.1-201ENST00000606756 1384 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5□□□□□ -1.61
VPS33AQ96AX1 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5□□□□□ -1.61
VPS33AQ96AX1 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS33AQ96AX1 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5□□□□□ -1.61
VPS33AQ96AX1 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5□□□□□ -1.61
VPS33AQ96AX1 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
VPS33AQ96AX1 OFD1P9Y-201ENST00000417699 1491 ntBASIC5□□□□□ -1.61
VPS33AQ96AX1 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 RN7SKP292-201ENST00000365522 317 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 RNU6-650P-201ENST00000365658 111 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 RNU6-317P-201ENST00000384031 107 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AP000357.1-201ENST00000409926 1165 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS33AQ96AX1 BMS1P17-202ENST00000416720 316 ntBASIC4.99□□□□□ -1.61
VPS33AQ96AX1 RPL34P3-201ENST00000421454 338 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms