Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ADAM5-202ENST00000399789 1942 ntBASIC5.73□□□□□ -1.49
SNED1Q8TER0 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNED1Q8TER0 AC107068.1-201ENST00000563286 4218 ntBASIC5.73□□□□□ -1.49
SNED1Q8TER0 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.73□□□□□ -1.49
SNED1Q8TER0 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNED1Q8TER0 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNED1Q8TER0 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNED1Q8TER0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNED1Q8TER0 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.73□□□□□ -1.49
SNED1Q8TER0 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.73□□□□□ -1.49
SNED1Q8TER0 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.73□□□□□ -1.49
SNED1Q8TER0 AC021660.1-201ENST00000465006 554 ntBASIC5.73□□□□□ -1.49
SNED1Q8TER0 MYL12BP2-201ENST00000503948 512 ntBASIC5.73□□□□□ -1.49
SNED1Q8TER0 MTCO1P35-201ENST00000515270 228 ntBASIC5.73□□□□□ -1.49
SNED1Q8TER0 RNU6-964P-201ENST00000516524 69 ntBASIC5.73□□□□□ -1.49
SNED1Q8TER0 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.73□□□□□ -1.49
SNED1Q8TER0 AP000827.1-201ENST00000527814 258 ntBASIC5.73□□□□□ -1.49
SNED1Q8TER0 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.73□□□□□ -1.49
SNED1Q8TER0 TRAV8-5-201ENST00000537369 341 ntBASIC5.73□□□□□ -1.49
SNED1Q8TER0 NPM1P5-201ENST00000557228 838 ntBASIC5.73□□□□□ -1.49
SNED1Q8TER0 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.73□□□□□ -1.49
SNED1Q8TER0 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.73□□□□□ -1.49
SNED1Q8TER0 AGGF1P9-201ENST00000561884 913 ntBASIC5.73□□□□□ -1.49
SNED1Q8TER0 AC027216.1-201ENST00000577726 685 ntBASIC5.73□□□□□ -1.49
SNED1Q8TER0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SNED1Q8TER0 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
SNED1Q8TER0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.73□□□□□ -1.49
SNED1Q8TER0 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.72□□□□□ -1.49
SNED1Q8TER0 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNED1Q8TER0 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.72□□□□□ -1.49
SNED1Q8TER0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNED1Q8TER0 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.72□□□□□ -1.49
SNED1Q8TER0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNED1Q8TER0 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.72□□□□□ -1.49
SNED1Q8TER0 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.72□□□□□ -1.49
SNED1Q8TER0 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
SNED1Q8TER0 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.72□□□□□ -1.49
SNED1Q8TER0 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.72□□□□□ -1.49
SNED1Q8TER0 AC017079.1-201ENST00000333650 415 ntBASIC5.72□□□□□ -1.49
SNED1Q8TER0 SNORA48.7-201ENST00000391302 135 ntBASIC5.72□□□□□ -1.49
SNED1Q8TER0 RNA5SP317-201ENST00000410176 116 ntBASIC5.72□□□□□ -1.49
SNED1Q8TER0 RNA5SP311-201ENST00000411290 116 ntBASIC5.72□□□□□ -1.49
SNED1Q8TER0 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNED1Q8TER0 RPS29P17-201ENST00000430795 166 ntBASIC5.72□□□□□ -1.49
SNED1Q8TER0 NDUFA5P1-201ENST00000433858 341 ntBASIC5.72□□□□□ -1.49
SNED1Q8TER0 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.72□□□□□ -1.49
SNED1Q8TER0 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.72□□□□□ -1.49
SNED1Q8TER0 RN7SL303P-201ENST00000469773 251 ntBASIC5.72□□□□□ -1.49
SNED1Q8TER0 RPL21P126-201ENST00000470049 478 ntBASIC5.72□□□□□ -1.49
SNED1Q8TER0 AC106806.2-201ENST00000509365 500 ntBASIC5.72□□□□□ -1.49
SNED1Q8TER0 RNA5SP315-201ENST00000516340 116 ntBASIC5.72□□□□□ -1.49
SNED1Q8TER0 RNA5SP312-201ENST00000517068 116 ntBASIC5.72□□□□□ -1.49
SNED1Q8TER0 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.72□□□□□ -1.49
SNED1Q8TER0 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.72□□□□□ -1.49
SNED1Q8TER0 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.72□□□□□ -1.49
SNED1Q8TER0 AL133243.1-201ENST00000614487 366 ntBASIC5.72□□□□□ -1.49
SNED1Q8TER0 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.72□□□□□ -1.49
SNED1Q8TER0 AC006213.5-201ENST00000619673 288 ntBASIC5.72□□□□□ -1.49
SNED1Q8TER0 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.72□□□□□ -1.49
SNED1Q8TER0 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.72□□□□□ -1.49
SNED1Q8TER0 OR8B1P-202ENST00000641132 1178 ntBASIC5.72□□□□□ -1.49
SNED1Q8TER0 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNED1Q8TER0 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNED1Q8TER0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SNED1Q8TER0 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNED1Q8TER0 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SNED1Q8TER0 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.71□□□□□ -1.49
SNED1Q8TER0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SNED1Q8TER0 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.71□□□□□ -1.5
SNED1Q8TER0 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SNED1Q8TER0 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SNED1Q8TER0 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNED1Q8TER0 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SNED1Q8TER0 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNED1Q8TER0 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNED1Q8TER0 AL050305.1-201ENST00000399993 1230 ntBASIC5.71□□□□□ -1.5
SNED1Q8TER0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.71□□□□□ -1.5
SNED1Q8TER0 NPM1P38-201ENST00000403835 865 ntBASIC5.71□□□□□ -1.5
SNED1Q8TER0 CASKP1-201ENST00000412870 582 ntBASIC5.71□□□□□ -1.5
SNED1Q8TER0 TMSB10P2-201ENST00000416049 131 ntBASIC5.71□□□□□ -1.5
SNED1Q8TER0 AL358176.3-201ENST00000420757 454 ntBASIC5.71□□□□□ -1.5
SNED1Q8TER0 RPS12P10-201ENST00000427031 377 ntBASIC5.71□□□□□ -1.5
SNED1Q8TER0 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.71□□□□□ -1.5
SNED1Q8TER0 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.71□□□□□ -1.5
SNED1Q8TER0 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.71□□□□□ -1.5
SNED1Q8TER0 AC041039.1-201ENST00000485656 536 ntBASIC5.71□□□□□ -1.5
SNED1Q8TER0 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.71□□□□□ -1.5
SNED1Q8TER0 SNORA74C-1-201ENST00000580726 201 ntBASIC5.71□□□□□ -1.5
SNED1Q8TER0 AL591034.3-201ENST00000605511 685 ntBASIC5.71□□□□□ -1.5
SNED1Q8TER0 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.71□□□□□ -1.5
SNED1Q8TER0 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.71□□□□□ -1.5
SNED1Q8TER0 MIR492-201ENST00000638676 116 ntBASIC5.71□□□□□ -1.5
SNED1Q8TER0 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNED1Q8TER0 AL078595.2-201ENST00000605309 1780 ntBASIC5.71□□□□□ -1.5
SNED1Q8TER0 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNED1Q8TER0 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SNED1Q8TER0 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SNED1Q8TER0 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNED1Q8TER0 AC022417.1-201ENST00000624768 1303 ntBASIC5.7□□□□□ -1.5
SNED1Q8TER0 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms