Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.57□□□□□ -1.52
GABPAQ06546 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.57□□□□□ -1.52
GABPAQ06546 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.57□□□□□ -1.52
GABPAQ06546 AC016839.1-201ENST00000578162 867 ntBASIC5.57□□□□□ -1.52
GABPAQ06546 AP005119.2-201ENST00000579735 1105 ntBASIC5.57□□□□□ -1.52
GABPAQ06546 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.57□□□□□ -1.52
GABPAQ06546 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.57□□□□□ -1.52
GABPAQ06546 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.57□□□□□ -1.52
GABPAQ06546 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.57□□□□□ -1.52
GABPAQ06546 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GABPAQ06546 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
GABPAQ06546 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
GABPAQ06546 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.57□□□□□ -1.52
GABPAQ06546 AC011755.1-201ENST00000623763 2049 ntBASIC5.57□□□□□ -1.52
GABPAQ06546 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.57□□□□□ -1.52
GABPAQ06546 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GABPAQ06546 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
GABPAQ06546 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.56□□□□□ -1.52
GABPAQ06546 AC012078.1-201ENST00000405035 1646 ntBASIC5.56□□□□□ -1.52
GABPAQ06546 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GABPAQ06546 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
GABPAQ06546 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
GABPAQ06546 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GABPAQ06546 AL592148.3-201ENST00000608771 2646 ntBASIC5.56□□□□□ -1.52
GABPAQ06546 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GABPAQ06546 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GABPAQ06546 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.56□□□□□ -1.52
GABPAQ06546 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GABPAQ06546 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
GABPAQ06546 AC136624.1-201ENST00000400791 413 ntBASIC5.56□□□□□ -1.52
GABPAQ06546 RN7SKP267-201ENST00000410381 285 ntBASIC5.56□□□□□ -1.52
GABPAQ06546 ELOCP19-201ENST00000411919 318 ntBASIC5.56□□□□□ -1.52
GABPAQ06546 RPL7P57-201ENST00000423238 740 ntBASIC5.56□□□□□ -1.52
GABPAQ06546 RGS17P1-201ENST00000423358 553 ntBASIC5.56□□□□□ -1.52
GABPAQ06546 RPL18P10-201ENST00000425606 538 ntBASIC5.56□□□□□ -1.52
GABPAQ06546 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.56□□□□□ -1.52
GABPAQ06546 CNOT7P1-201ENST00000429006 852 ntBASIC5.56□□□□□ -1.52
GABPAQ06546 YWHAZP2-201ENST00000440317 728 ntBASIC5.56□□□□□ -1.52
GABPAQ06546 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.56□□□□□ -1.52
GABPAQ06546 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.56□□□□□ -1.52
GABPAQ06546 AC012123.2-201ENST00000485809 248 ntBASIC5.56□□□□□ -1.52
GABPAQ06546 MTND4LP2-201ENST00000502312 285 ntBASIC5.56□□□□□ -1.52
GABPAQ06546 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.56□□□□□ -1.52
GABPAQ06546 KCTD9P6-201ENST00000522306 950 ntBASIC5.56□□□□□ -1.52
GABPAQ06546 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.56□□□□□ -1.52
GABPAQ06546 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.56□□□□□ -1.52
GABPAQ06546 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.56□□□□□ -1.52
GABPAQ06546 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.56□□□□□ -1.52
GABPAQ06546 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.56□□□□□ -1.52
GABPAQ06546 AC004232.3-201ENST00000622977 525 ntBASIC5.56□□□□□ -1.52
GABPAQ06546 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.56□□□□□ -1.52
GABPAQ06546 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.56□□□□□ -1.52
GABPAQ06546 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
GABPAQ06546 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GABPAQ06546 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
GABPAQ06546 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
GABPAQ06546 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
GABPAQ06546 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.55□□□□□ -1.52
GABPAQ06546 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
GABPAQ06546 AC125257.1-201ENST00000560400 2930 ntBASIC5.55□□□□□ -1.52
GABPAQ06546 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
GABPAQ06546 U3.23-201ENST00000391132 200 ntBASIC5.55□□□□□ -1.52
GABPAQ06546 U3.35-201ENST00000408405 208 ntBASIC5.55□□□□□ -1.52
GABPAQ06546 DPPA2P2-201ENST00000418220 897 ntBASIC5.55□□□□□ -1.52
GABPAQ06546 AC104333.2-201ENST00000422630 192 ntBASIC5.55□□□□□ -1.52
GABPAQ06546 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.55□□□□□ -1.52
GABPAQ06546 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.55□□□□□ -1.52
GABPAQ06546 MORF4L1P4-201ENST00000450245 976 ntBASIC5.55□□□□□ -1.52
GABPAQ06546 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.55□□□□□ -1.52
GABPAQ06546 RNU6-943P-201ENST00000516960 98 ntBASIC5.55□□□□□ -1.52
GABPAQ06546 RNA5SP230-201ENST00000517039 122 ntBASIC5.55□□□□□ -1.52
GABPAQ06546 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.55□□□□□ -1.52
GABPAQ06546 AC008676.3-201ENST00000521237 435 ntBASIC5.55□□□□□ -1.52
GABPAQ06546 AC068831.4-201ENST00000556118 109 ntBASIC5.55□□□□□ -1.52
GABPAQ06546 AC127024.5-201ENST00000580085 462 ntBASIC5.55□□□□□ -1.52
GABPAQ06546 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.55□□□□□ -1.52
GABPAQ06546 RPL26P30-202ENST00000602923 645 ntBASIC5.55□□□□□ -1.52
GABPAQ06546 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.55□□□□□ -1.52
GABPAQ06546 Z95327.3-201ENST00000610385 572 ntBASIC5.55□□□□□ -1.52
GABPAQ06546 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.55□□□□□ -1.52
GABPAQ06546 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
GABPAQ06546 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
GABPAQ06546 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
GABPAQ06546 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
GABPAQ06546 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.55□□□□□ -1.52
GABPAQ06546 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
GABPAQ06546 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
GABPAQ06546 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GABPAQ06546 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
GABPAQ06546 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
GABPAQ06546 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
GABPAQ06546 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
GABPAQ06546 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
GABPAQ06546 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
GABPAQ06546 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 AL589994.1-201ENST00000404962 340 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 NACAP7-201ENST00000407371 609 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 AL035696.2-201ENST00000407941 709 ntBASIC5.54□□□□□ -1.52
GABPAQ06546 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GABPAQ06546 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms