Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC073465.2-201ENST00000440938 498 ntBASIC4.92□□□□□ -1.62
SOX2P48431 ARL5AP2-201ENST00000444698 533 ntBASIC4.92□□□□□ -1.62
SOX2P48431 MYO5BP2-201ENST00000449815 1277 ntBASIC4.92□□□□□ -1.62
SOX2P48431 AC233982.1-201ENST00000451247 436 ntBASIC4.92□□□□□ -1.62
SOX2P48431 AC110749.1-201ENST00000462007 357 ntBASIC4.92□□□□□ -1.62
SOX2P48431 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.92□□□□□ -1.62
SOX2P48431 AC090602.1-201ENST00000469695 252 ntBASIC4.92□□□□□ -1.62
SOX2P48431 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SOX2P48431 ATP5LP5-201ENST00000483050 299 ntBASIC4.92□□□□□ -1.62
SOX2P48431 RPL32P33-201ENST00000487023 394 ntBASIC4.92□□□□□ -1.62
SOX2P48431 SNRPCP11-201ENST00000492453 205 ntBASIC4.92□□□□□ -1.62
SOX2P48431 RN7SL362P-201ENST00000494228 267 ntBASIC4.92□□□□□ -1.62
SOX2P48431 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.92□□□□□ -1.62
SOX2P48431 AC074255.1-201ENST00000511259 501 ntBASIC4.92□□□□□ -1.62
SOX2P48431 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.92□□□□□ -1.62
SOX2P48431 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.92□□□□□ -1.62
SOX2P48431 AP001000.1-201ENST00000526843 742 ntBASIC4.92□□□□□ -1.62
SOX2P48431 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC4.92□□□□□ -1.62
SOX2P48431 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SOX2P48431 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SOX2P48431 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.92□□□□□ -1.62
SOX2P48431 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.92□□□□□ -1.62
SOX2P48431 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.92□□□□□ -1.62
SOX2P48431 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.92□□□□□ -1.62
SOX2P48431 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX2P48431 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX2P48431 MTCO1P40-201ENST00000574371 625 ntBASIC4.92□□□□□ -1.62
SOX2P48431 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.92□□□□□ -1.62
SOX2P48431 AC022662.1-201ENST00000580252 331 ntBASIC4.92□□□□□ -1.62
SOX2P48431 MIR548Y-201ENST00000582739 110 ntBASIC4.92□□□□□ -1.62
SOX2P48431 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.92□□□□□ -1.62
SOX2P48431 AL109653.1-201ENST00000603091 248 ntBASIC4.92□□□□□ -1.62
SOX2P48431 AL136131.3-201ENST00000607600 188 ntBASIC4.92□□□□□ -1.62
SOX2P48431 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.92□□□□□ -1.62
SOX2P48431 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX2P48431 uc_338.29-201ENST00000615099 168 ntBASIC4.92□□□□□ -1.62
SOX2P48431 AC090607.5-201ENST00000615692 224 ntBASIC4.92□□□□□ -1.62
SOX2P48431 VN1R7P-201ENST00000619242 903 ntBASIC4.92□□□□□ -1.62
SOX2P48431 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX2P48431 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX2P48431 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
SOX2P48431 HSPD1P9-201ENST00000420325 1636 ntBASIC4.92□□□□□ -1.62
SOX2P48431 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SOX2P48431 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.92□□□□□ -1.62
SOX2P48431 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.92□□□□□ -1.62
SOX2P48431 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SOX2P48431 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SOX2P48431 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SOX2P48431 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SOX2P48431 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SOX2P48431 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
SOX2P48431 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SOX2P48431 TMSB4XP2-201ENST00000335179 210 ntBASIC4.91□□□□□ -1.62
SOX2P48431 NACA3P-201ENST00000359690 648 ntBASIC4.91□□□□□ -1.62
SOX2P48431 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 SNORA51.9-201ENST00000384295 124 ntBASIC4.91□□□□□ -1.62
SOX2P48431 MIR320B1-201ENST00000390209 79 ntBASIC4.91□□□□□ -1.62
SOX2P48431 SKINT1L-201ENST00000401057 817 ntBASIC4.91□□□□□ -1.62
SOX2P48431 AL136131.1-201ENST00000406079 803 ntBASIC4.91□□□□□ -1.62
SOX2P48431 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 MRPL53P1-201ENST00000414323 319 ntBASIC4.91□□□□□ -1.62
SOX2P48431 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.91□□□□□ -1.62
SOX2P48431 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.91□□□□□ -1.62
SOX2P48431 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.91□□□□□ -1.62
SOX2P48431 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.91□□□□□ -1.62
SOX2P48431 RPL7P29-201ENST00000437151 728 ntBASIC4.91□□□□□ -1.62
SOX2P48431 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.91□□□□□ -1.62
SOX2P48431 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.91□□□□□ -1.62
SOX2P48431 AC005002.1-201ENST00000447458 540 ntBASIC4.91□□□□□ -1.62
SOX2P48431 AC007327.1-201ENST00000447461 264 ntBASIC4.91□□□□□ -1.62
SOX2P48431 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.91□□□□□ -1.62
SOX2P48431 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.91□□□□□ -1.62
SOX2P48431 AC091959.2-201ENST00000477363 321 ntBASIC4.91□□□□□ -1.62
SOX2P48431 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.91□□□□□ -1.62
SOX2P48431 AC106822.1-201ENST00000502647 526 ntBASIC4.91□□□□□ -1.62
SOX2P48431 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.91□□□□□ -1.62
SOX2P48431 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.91□□□□□ -1.62
SOX2P48431 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.91□□□□□ -1.62
SOX2P48431 NACAP5-201ENST00000509863 636 ntBASIC4.91□□□□□ -1.62
SOX2P48431 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.91□□□□□ -1.62
SOX2P48431 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.91□□□□□ -1.62
SOX2P48431 TMEM97P2-201ENST00000517841 403 ntBASIC4.91□□□□□ -1.62
SOX2P48431 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.91□□□□□ -1.62
SOX2P48431 AC116917.1-201ENST00000520558 305 ntBASIC4.91□□□□□ -1.62
SOX2P48431 AP000859.1-201ENST00000525536 307 ntBASIC4.91□□□□□ -1.62
SOX2P48431 MTND2P26-201ENST00000528255 1029 ntBASIC4.91□□□□□ -1.62
SOX2P48431 PMS2P3-207ENST00000529061 717 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms