Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.07□□□□□ -1.6
RETP07949 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.07□□□□□ -1.6
RETP07949 CENPIP1-201ENST00000425713 902 ntBASIC5.07□□□□□ -1.6
RETP07949 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.07□□□□□ -1.6
RETP07949 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.07□□□□□ -1.6
RETP07949 CYCSP24-201ENST00000445119 316 ntBASIC5.07□□□□□ -1.6
RETP07949 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.07□□□□□ -1.6
RETP07949 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.07□□□□□ -1.6
RETP07949 RPL21P6-201ENST00000479171 504 ntBASIC5.07□□□□□ -1.6
RETP07949 AC022133.1-201ENST00000490961 571 ntBASIC5.07□□□□□ -1.6
RETP07949 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.07□□□□□ -1.6
RETP07949 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.07□□□□□ -1.6
RETP07949 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.07□□□□□ -1.6
RETP07949 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.07□□□□□ -1.6
RETP07949 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RETP07949 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.07□□□□□ -1.6
RETP07949 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.07□□□□□ -1.6
RETP07949 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.07□□□□□ -1.6
RETP07949 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.07□□□□□ -1.6
RETP07949 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.07□□□□□ -1.6
RETP07949 AC103792.1-201ENST00000603591 919 ntBASIC5.07□□□□□ -1.6
RETP07949 AC105254.2-201ENST00000603636 436 ntBASIC5.07□□□□□ -1.6
RETP07949 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.07□□□□□ -1.6
RETP07949 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.07□□□□□ -1.6
RETP07949 AP005131.7-201ENST00000610087 611 ntBASIC5.07□□□□□ -1.6
RETP07949 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RETP07949 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.07□□□□□ -1.6
RETP07949 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.07□□□□□ -1.6
RETP07949 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RETP07949 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.07□□□□□ -1.6
RETP07949 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RETP07949 KARSP3-201ENST00000571212 1504 ntBASIC5.07□□□□□ -1.6
RETP07949 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RETP07949 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.07□□□□□ -1.6
RETP07949 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.07□□□□□ -1.6
RETP07949 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
RETP07949 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RETP07949 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.06□□□□□ -1.6
RETP07949 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
RETP07949 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RETP07949 THAP12P5-201ENST00000405864 2275 ntBASIC5.06□□□□□ -1.6
RETP07949 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RETP07949 AC017079.1-201ENST00000333650 415 ntBASIC5.06□□□□□ -1.6
RETP07949 AL672167.2-201ENST00000377164 879 ntBASIC5.06□□□□□ -1.6
RETP07949 RNU6-233P-201ENST00000410845 141 ntBASIC5.06□□□□□ -1.6
RETP07949 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.06□□□□□ -1.6
RETP07949 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.06□□□□□ -1.6
RETP07949 AC046176.1-201ENST00000435260 1170 ntBASIC5.06□□□□□ -1.6
RETP07949 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.06□□□□□ -1.6
RETP07949 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.06□□□□□ -1.6
RETP07949 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RETP07949 NIP7P2-201ENST00000485801 544 ntBASIC5.06□□□□□ -1.6
RETP07949 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.06□□□□□ -1.6
RETP07949 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.06□□□□□ -1.6
RETP07949 AC022884.2-201ENST00000578535 580 ntBASIC5.06□□□□□ -1.6
RETP07949 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.06□□□□□ -1.6
RETP07949 MIR4715-201ENST00000584117 79 ntBASIC5.06□□□□□ -1.6
RETP07949 MIR3936-201ENST00000584304 110 ntBASIC5.06□□□□□ -1.6
RETP07949 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.06□□□□□ -1.6
RETP07949 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.06□□□□□ -1.6
RETP07949 AC011453.2-201ENST00000603737 729 ntBASIC5.06□□□□□ -1.6
RETP07949 AL008729.2-201ENST00000606393 473 ntBASIC5.06□□□□□ -1.6
RETP07949 AL392048.1-201ENST00000613946 534 ntBASIC5.06□□□□□ -1.6
RETP07949 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.06□□□□□ -1.6
RETP07949 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.06□□□□□ -1.6
RETP07949 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
RETP07949 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RETP07949 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RETP07949 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.06□□□□□ -1.6
RETP07949 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RETP07949 AL132640.2-201ENST00000559968 1698 ntBASIC5.05□□□□□ -1.6
RETP07949 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
RETP07949 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RETP07949 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.05□□□□□ -1.6
RETP07949 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RETP07949 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RETP07949 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RETP07949 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RETP07949 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RETP07949 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.05□□□□□ -1.6
RETP07949 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RETP07949 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RETP07949 OR4K15-201ENST00000305051 1216 ntBASIC5.05□□□□□ -1.6
RETP07949 RNA5SP191-201ENST00000362585 102 ntBASIC5.05□□□□□ -1.6
RETP07949 RN7SKP153-201ENST00000365026 316 ntBASIC5.05□□□□□ -1.6
RETP07949 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
RETP07949 SNORA48.7-201ENST00000391302 135 ntBASIC5.05□□□□□ -1.6
RETP07949 HMGB3P7-201ENST00000400214 611 ntBASIC5.05□□□□□ -1.6
RETP07949 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.05□□□□□ -1.6
RETP07949 CTSL3P-202ENST00000412179 788 ntBASIC5.05□□□□□ -1.6
RETP07949 AC007738.1-201ENST00000413892 348 ntBASIC5.05□□□□□ -1.6
RETP07949 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.05□□□□□ -1.6
RETP07949 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.05□□□□□ -1.6
RETP07949 AL161722.2-201ENST00000434731 981 ntBASIC5.05□□□□□ -1.6
RETP07949 AC073143.1-201ENST00000436316 395 ntBASIC5.05□□□□□ -1.6
RETP07949 OR7E125P-201ENST00000443450 846 ntBASIC5.05□□□□□ -1.6
RETP07949 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.05□□□□□ -1.6
RETP07949 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.05□□□□□ -1.6
RETP07949 NUTF2P7-201ENST00000453086 375 ntBASIC5.05□□□□□ -1.6
RETP07949 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms