Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CLDN9O95484 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CLDN9O95484 AC099654.2-201ENST00000433031 1980 ntBASIC4.69□□□□□ -1.66
CLDN9O95484 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN9O95484 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN9O95484 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.69□□□□□ -1.66
CLDN9O95484 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.69□□□□□ -1.66
CLDN9O95484 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CLDN9O95484 U8.4-201ENST00000363626 134 ntBASIC4.69□□□□□ -1.66
CLDN9O95484 RNU1-106P-201ENST00000384382 164 ntBASIC4.69□□□□□ -1.66
CLDN9O95484 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.69□□□□□ -1.66
CLDN9O95484 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.69□□□□□ -1.66
CLDN9O95484 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.69□□□□□ -1.66
CLDN9O95484 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN9O95484 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.69□□□□□ -1.66
CLDN9O95484 AC004938.1-201ENST00000438468 308 ntBASIC4.69□□□□□ -1.66
CLDN9O95484 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.69□□□□□ -1.66
CLDN9O95484 OTX2P1-201ENST00000450956 354 ntBASIC4.69□□□□□ -1.66
CLDN9O95484 AC004815.1-201ENST00000484185 331 ntBASIC4.69□□□□□ -1.66
CLDN9O95484 AC140172.1-201ENST00000502928 141 ntBASIC4.69□□□□□ -1.66
CLDN9O95484 MRPS33P2-201ENST00000507850 322 ntBASIC4.69□□□□□ -1.66
CLDN9O95484 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.69□□□□□ -1.66
CLDN9O95484 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.69□□□□□ -1.66
CLDN9O95484 AL049839.1-201ENST00000556151 657 ntBASIC4.69□□□□□ -1.66
CLDN9O95484 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.69□□□□□ -1.66
CLDN9O95484 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.69□□□□□ -1.66
CLDN9O95484 AP001521.2-201ENST00000608772 546 ntBASIC4.69□□□□□ -1.66
CLDN9O95484 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.69□□□□□ -1.66
CLDN9O95484 AC015922.4-201ENST00000612568 690 ntBASIC4.69□□□□□ -1.66
CLDN9O95484 AC016769.4-201ENST00000616893 535 ntBASIC4.69□□□□□ -1.66
CLDN9O95484 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN9O95484 AC015871.5-202ENST00000623252 701 ntBASIC4.69□□□□□ -1.66
CLDN9O95484 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.69□□□□□ -1.66
CLDN9O95484 TTC39DP-201ENST00000416781 1688 ntBASIC4.69□□□□□ -1.66
CLDN9O95484 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.69□□□□□ -1.66
CLDN9O95484 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.69□□□□□ -1.66
CLDN9O95484 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN9O95484 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLDN9O95484 ZNF652P1-201ENST00000442420 1309 ntBASIC4.69□□□□□ -1.66
CLDN9O95484 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN9O95484 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CLDN9O95484 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN9O95484 OR10AB1P-202ENST00000641219 1686 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
CLDN9O95484 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN9O95484 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN9O95484 RNA5SP105-201ENST00000391123 113 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.68□□□□□ -1.66
CLDN9O95484 GTF2IP5-201ENST00000414608 731 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 OR51A6P-201ENST00000418680 1004 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.68□□□□□ -1.66
CLDN9O95484 PTMAP6-201ENST00000439110 327 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 AC092647.3-201ENST00000443044 633 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.68□□□□□ -1.66
CLDN9O95484 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.68□□□□□ -1.66
CLDN9O95484 OR7L1P-201ENST00000456181 380 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 RNA5SP103-201ENST00000459503 118 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 RPL23AP56-201ENST00000460778 453 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 AC093270.2-201ENST00000486157 792 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 OR9N1P-201ENST00000491296 333 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 RPS23P1-201ENST00000491662 432 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.68□□□□□ -1.66
CLDN9O95484 RPS27AP18-201ENST00000515536 459 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 RN7SKP147-201ENST00000517154 244 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 AC013701.1-201ENST00000522657 465 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.68□□□□□ -1.66
CLDN9O95484 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.68□□□□□ -1.66
CLDN9O95484 AC044860.2-201ENST00000561005 179 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.68□□□□□ -1.66
CLDN9O95484 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.68□□□□□ -1.66
CLDN9O95484 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.68□□□□□ -1.66
CLDN9O95484 AL121932.1-201ENST00000605542 214 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.68□□□□□ -1.66
CLDN9O95484 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.68□□□□□ -1.66
CLDN9O95484 AL022401.1-201ENST00000619498 108 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 MIR6730-201ENST00000622213 67 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 CR381572.2-201ENST00000624852 397 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.68□□□□□ -1.66
CLDN9O95484 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.68□□□□□ -1.66
CLDN9O95484 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.68□□□□□ -1.66
CLDN9O95484 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.68□□□□□ -1.66
CLDN9O95484 AL356317.1-201ENST00000396110 1436 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN9O95484 AC021242.1-201ENST00000507315 2035 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 MAPK10-320ENST00000641462 6696 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLDN9O95484 HSPA8P18-201ENST00000439846 1928 ntBASIC4.68□□□□□ -1.66
CLDN9O95484 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.68□□□□□ -1.66
CLDN9O95484 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.68□□□□□ -1.66
CLDN9O95484 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN9O95484 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN9O95484 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.67□□□□□ -1.66
CLDN9O95484 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CLDN9O95484 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN9O95484 SMG1P6-201ENST00000532337 2930 ntBASIC4.67□□□□□ -1.66
CLDN9O95484 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.67□□□□□ -1.66
CLDN9O95484 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN9O95484 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLDN9O95484 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms