Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 DNAJA1P4-201ENST00000406473 1166 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 FCF1P5-201ENST00000406490 482 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 VN1R8P-201ENST00000407739 893 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 RNU2-22P-201ENST00000411266 212 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 RN7SKP293-201ENST00000411389 296 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 AC073335.1-201ENST00000427776 363 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 RPL7P33-201ENST00000444159 742 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 RPL7L1P1-201ENST00000448259 785 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC3.73□□□□□ -1.81
SSSCA1O60232 RPS27AP2-201ENST00000457576 465 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 AC010469.1-201ENST00000463864 576 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.73□□□□□ -1.81
SSSCA1O60232 AC008897.1-201ENST00000494006 347 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.73□□□□□ -1.81
SSSCA1O60232 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.73□□□□□ -1.81
SSSCA1O60232 MRPS33P2-201ENST00000507850 322 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 AC091868.1-201ENST00000508746 304 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.73□□□□□ -1.81
SSSCA1O60232 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SSSCA1O60232 RNU6-1334P-201ENST00000516032 105 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC3.73□□□□□ -1.81
SSSCA1O60232 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.73□□□□□ -1.81
SSSCA1O60232 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.73□□□□□ -1.81
SSSCA1O60232 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC3.73□□□□□ -1.81
SSSCA1O60232 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SSSCA1O60232 AC084759.1-201ENST00000561168 290 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 AC022726.1-201ENST00000587475 207 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.73□□□□□ -1.81
SSSCA1O60232 AC107993.1-201ENST00000591343 684 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.73□□□□□ -1.81
SSSCA1O60232 AC133552.5-201ENST00000604266 540 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC3.73□□□□□ -1.81
SSSCA1O60232 AC007497.1-201ENST00000610421 561 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 AC015813.4-201ENST00000610469 179 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 AC126175.1-201ENST00000617041 758 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 AP001005.3-201ENST00000622049 129 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 AC006840.1-201ENST00000623069 542 ntBASIC3.73□□□□□ -1.81
SSSCA1O60232 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SSSCA1O60232 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SSSCA1O60232 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSSCA1O60232 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSSCA1O60232 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSSCA1O60232 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SSSCA1O60232 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SSSCA1O60232 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.73□□□□□ -1.81
SSSCA1O60232 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SSSCA1O60232 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SSSCA1O60232 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.72□□□□□ -1.81
SSSCA1O60232 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SSSCA1O60232 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SSSCA1O60232 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSSCA1O60232 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC3.72□□□□□ -1.81
SSSCA1O60232 RNU1-63P-201ENST00000383902 164 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 U3.30-201ENST00000391308 210 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSSCA1O60232 AC114755.2-201ENST00000413520 361 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 AL645608.4-201ENST00000423619 154 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC3.72□□□□□ -1.81
SSSCA1O60232 OR52B5P-201ENST00000435337 951 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 SPRYD7P1-201ENST00000443861 570 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 GEMIN8P3-201ENST00000445417 720 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC3.72□□□□□ -1.81
SSSCA1O60232 AL935212.3-201ENST00000450729 284 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SSSCA1O60232 RPSAP39-201ENST00000467439 883 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 OR2AO1P-201ENST00000476497 403 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 AC108693.1-201ENST00000496068 432 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 PFN1P8-201ENST00000497012 543 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 RNA5SP360-201ENST00000516555 118 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 BUD31P1-201ENST00000521828 359 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 IFITM8P-201ENST00000522529 394 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSSCA1O60232 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SSSCA1O60232 SMARCE1P3-201ENST00000553649 1231 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 AC011487.3-201ENST00000593607 453 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 AC008638.3-201ENST00000603341 463 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 AC004477.3-201ENST00000614061 590 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.72□□□□□ -1.81
SSSCA1O60232 CR381572.2-201ENST00000624852 397 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.72□□□□□ -1.81
SSSCA1O60232 OR52B5P-202ENST00000641118 1110 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 AL391684.1-202ENST00000641293 1636 ntBASIC3.72□□□□□ -1.81
SSSCA1O60232 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SSSCA1O60232 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SSSCA1O60232 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
SSSCA1O60232 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.81
SSSCA1O60232 AL442639.1-201ENST00000625030 1899 ntBASIC3.71□□□□□ -1.82
SSSCA1O60232 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.71□□□□□ -1.82
SSSCA1O60232 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
SSSCA1O60232 ZFRP1-201ENST00000457579 2970 ntBASIC3.71□□□□□ -1.82
SSSCA1O60232 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.71□□□□□ -1.82
SSSCA1O60232 RNA5SP178-201ENST00000410380 128 ntBASIC3.71□□□□□ -1.82
SSSCA1O60232 AL160275.2-201ENST00000412010 394 ntBASIC3.71□□□□□ -1.82
SSSCA1O60232 VN1R3-201ENST00000418822 919 ntBASIC3.71□□□□□ -1.82
SSSCA1O60232 AC245047.2-201ENST00000441060 530 ntBASIC3.71□□□□□ -1.82
SSSCA1O60232 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC3.71□□□□□ -1.82
SSSCA1O60232 FAR2P1-206ENST00000449736 709 ntBASIC3.71□□□□□ -1.82
SSSCA1O60232 AL389915.2-201ENST00000454576 441 ntBASIC3.71□□□□□ -1.82
SSSCA1O60232 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms