Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AC103987.3-201ENST00000582071 292 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AC112220.3-201ENST00000605502 502 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AC005332.6-201ENST00000613178 446 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AC090116.1-201ENST00000615679 446 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AL445670.1-201ENST00000618889 801 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AC111152.1-202ENST00000635848 339 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 MKKS-204ENST00000639674 192 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 MTCO1P7-201ENST00000419523 1542 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 MAPK10-287ENST00000641217 3037 ntBASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TRIM55Q9BYV6 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AC083837.1-201ENST00000565297 2994 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AC092079.1-201ENST00000558620 1985 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 UBBP1-201ENST00000392399 473 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AL359694.1-201ENST00000403247 604 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 RNU2-65P-201ENST00000410162 185 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AL359092.1-201ENST00000417156 265 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 MRPS21P5-201ENST00000417885 231 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 BOLA3P4-201ENST00000418151 400 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AC016027.5-201ENST00000427227 210 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 RPL31P54-201ENST00000429803 370 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AC008072.1-201ENST00000434254 824 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AC004865.1-201ENST00000442276 1003 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 RAB11AP1-201ENST00000442978 646 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 CFL1P4-201ENST00000451536 498 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 DNAJB5P1-201ENST00000454004 806 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 PFN1P8-201ENST00000497012 543 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 MAST4-IT1-201ENST00000514241 658 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 snoU109.6-201ENST00000516831 118 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AL121766.1-201ENST00000547436 487 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AC138915.2-201ENST00000569776 97 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 GLYATL1P2-202ENST00000588046 902 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AC063977.7-201ENST00000594454 337 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AF131215.7-201ENST00000602443 707 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AC023813.4-201ENST00000607580 580 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AC092653.1-201ENST00000608509 531 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AC073592.6-201ENST00000624271 415 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 MIR1910-201ENST00000636955 80 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AC116667.2-201ENST00000641075 823 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 AC004656.1-201ENST00000568479 4951 ntBASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.32□□□□□ -1.4
TRIM55Q9BYV6 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms