Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 AL031119.1-201ENST00000404707 1879 ntBASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 HSPA8P18-201ENST00000439846 1928 ntBASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 RNA5SP191-201ENST00000362585 102 ntBASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 RNU4-44P-201ENST00000363050 141 ntBASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 OR2AM1P-201ENST00000422137 422 ntBASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 RPS26P2-201ENST00000440331 348 ntBASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 Z80107.2-201ENST00000445127 392 ntBASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 MORF4L1P4-201ENST00000450245 976 ntBASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 HIGD1AP8-201ENST00000453927 274 ntBASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 AURKAPS2-201ENST00000454983 333 ntBASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 CYCSP34-201ENST00000458172 304 ntBASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 OR9N1P-201ENST00000491296 333 ntBASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 RPS4XP18-201ENST00000495480 763 ntBASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 SCARNA22-201ENST00000503991 125 ntBASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 GAPDHP56-201ENST00000506031 988 ntBASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 BTG4P1-201ENST00000510421 183 ntBASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 HIGD1AP5-201ENST00000529959 259 ntBASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 AC006840.1-201ENST00000623069 542 ntBASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 AC108751.5-201ENST00000492880 1336 ntBASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 AC026951.1-201ENST00000559530 2459 ntBASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
RSPO3Q9BXY4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 AL121950.1-201ENST00000624993 2077 ntBASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 MAPK10-349ENST00000641767 3661 ntBASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 RNU1-82P-201ENST00000390851 165 ntBASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 AL021331.1-201ENST00000402817 582 ntBASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 AL080315.1-201ENST00000406055 466 ntBASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 RN7SKP247-201ENST00000411094 308 ntBASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 RSU1P3-201ENST00000412878 835 ntBASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 AC004074.1-201ENST00000421810 1063 ntBASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 Z74021.1-201ENST00000423610 407 ntBASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 AC092647.3-201ENST00000443044 633 ntBASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 AC073850.1-201ENST00000449243 255 ntBASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 AC091685.2-201ENST00000454924 864 ntBASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 RPL7AP10-201ENST00000481016 791 ntBASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 AC109462.1-201ENST00000491087 368 ntBASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 AC091979.2-201ENST00000607514 214 ntBASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 Mico1.1-201ENST00000611698 204 ntBASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 AC009163.6-201ENST00000612367 342 ntBASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 AC010435.1-201ENST00000623353 1177 ntBASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 NCLP2-201ENST00000416078 1462 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms