Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RPL21P131-201ENST00000497298 483 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.05□□□□□ -1.44
HPS3Q969F9 PRELID3BP5-201ENST00000508612 460 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 HPRT1P1-201ENST00000509498 657 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.05□□□□□ -1.44
HPS3Q969F9 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
HPS3Q969F9 RNA5SP303-201ENST00000516192 130 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 RNU6-311P-201ENST00000516224 102 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 SCARNA20.4-201ENST00000516969 131 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.05□□□□□ -1.44
HPS3Q969F9 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.05□□□□□ -1.44
HPS3Q969F9 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6.05□□□□□ -1.44
HPS3Q969F9 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.05□□□□□ -1.44
HPS3Q969F9 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.05□□□□□ -1.44
HPS3Q969F9 AC025260.1-201ENST00000548858 430 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.05□□□□□ -1.44
HPS3Q969F9 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.05□□□□□ -1.44
HPS3Q969F9 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC6.05□□□□□ -1.44
HPS3Q969F9 MIR1273E-201ENST00000581165 102 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.05□□□□□ -1.44
HPS3Q969F9 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.05□□□□□ -1.44
HPS3Q969F9 AL357094.1-201ENST00000603845 844 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 AL450336.1-201ENST00000605180 586 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 FRG1HP-204ENST00000617940 757 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 AL035461.2-201ENST00000619201 524 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 AC007342.8-201ENST00000623278 678 ntBASIC6.05□□□□□ -1.44
HPS3Q969F9 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.05□□□□□ -1.44
HPS3Q969F9 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HPS3Q969F9 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HPS3Q969F9 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.05□□□□□ -1.44
HPS3Q969F9 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
HPS3Q969F9 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.05□□□□□ -1.44
HPS3Q969F9 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HPS3Q969F9 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HPS3Q969F9 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HPS3Q969F9 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HPS3Q969F9 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.05□□□□□ -1.44
HPS3Q969F9 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
HPS3Q969F9 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HPS3Q969F9 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HPS3Q969F9 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HPS3Q969F9 CIR1P2-201ENST00000514821 1342 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 BCORP1-203ENST00000513194 5093 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 ADAM24P-201ENST00000398655 2101 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HPS3Q969F9 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HPS3Q969F9 AL360270.2-201ENST00000562952 5985 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HPS3Q969F9 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HPS3Q969F9 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
HPS3Q969F9 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
HPS3Q969F9 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HPS3Q969F9 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HPS3Q969F9 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.04□□□□□ -1.44
HPS3Q969F9 MIR551A-201ENST00000385042 96 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 MIR320B1-201ENST00000390209 79 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.04□□□□□ -1.44
HPS3Q969F9 AL354766.1-201ENST00000423396 542 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.04□□□□□ -1.44
HPS3Q969F9 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.04□□□□□ -1.44
HPS3Q969F9 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HPS3Q969F9 AL592437.1-201ENST00000443781 492 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 OR51B8P-201ENST00000449892 769 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 RPL35AP19-201ENST00000469425 329 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 RN7SL273P-201ENST00000481561 299 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 AC079203.1-201ENST00000487972 404 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 AC023050.1-201ENST00000498198 304 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 IGBP1P4-201ENST00000503202 879 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.04□□□□□ -1.44
HPS3Q969F9 AC111193.1-201ENST00000504097 155 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC6.04□□□□□ -1.44
HPS3Q969F9 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC6.04□□□□□ -1.44
HPS3Q969F9 RN7SKP287-201ENST00000516546 266 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC6.04□□□□□ -1.44
HPS3Q969F9 AC104417.1-201ENST00000523974 751 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.04□□□□□ -1.44
HPS3Q969F9 AP004607.2-201ENST00000533949 322 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 AC008083.2-201ENST00000546707 476 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.04□□□□□ -1.44
HPS3Q969F9 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC6.04□□□□□ -1.44
HPS3Q969F9 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.04□□□□□ -1.44
HPS3Q969F9 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC6.04□□□□□ -1.44
HPS3Q969F9 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.04□□□□□ -1.44
HPS3Q969F9 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.04□□□□□ -1.44
HPS3Q969F9 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
HPS3Q969F9 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.04□□□□□ -1.44
HPS3Q969F9 AC234772.3-201ENST00000602277 528 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 FO393422.1-201ENST00000603908 708 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 AC093424.1-201ENST00000604999 338 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 AC005377.1-201ENST00000605126 456 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 AC106052.1-201ENST00000608029 497 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 AC104985.3-201ENST00000623479 597 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 AC138907.10-201ENST00000623708 983 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 AC021106.3-201ENST00000623925 531 ntBASIC6.04□□□□□ -1.44
HPS3Q969F9 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.04□□□□□ -1.44
HPS3Q969F9 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HPS3Q969F9 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
HPS3Q969F9 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms