Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC136428.4-201ENST00000634254 1155 ntBASIC4.98□□□□□ -1.61
CDH12P55289 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH12P55289 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH12P55289 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH12P55289 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CDH12P55289 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH12P55289 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH12P55289 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH12P55289 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDH12P55289 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CDH12P55289 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH12P55289 AC004817.4-201ENST00000602396 3625 ntBASIC4.97□□□□□ -1.61
CDH12P55289 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH12P55289 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
CDH12P55289 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH12P55289 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.97□□□□□ -1.61
CDH12P55289 AC017007.4-201ENST00000503353 1352 ntBASIC4.97□□□□□ -1.61
CDH12P55289 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH12P55289 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CDH12P55289 AC023490.2-201ENST00000359859 470 ntBASIC4.97□□□□□ -1.61
CDH12P55289 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH12P55289 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CDH12P55289 DBIP1-201ENST00000401435 260 ntBASIC4.97□□□□□ -1.61
CDH12P55289 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH12P55289 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH12P55289 USP9YP21-201ENST00000420603 432 ntBASIC4.97□□□□□ -1.61
CDH12P55289 RPL24P2-201ENST00000421023 475 ntBASIC4.97□□□□□ -1.61
CDH12P55289 HSPE1P16-201ENST00000426640 348 ntBASIC4.97□□□□□ -1.61
CDH12P55289 AC092634.2-201ENST00000428146 1010 ntBASIC4.97□□□□□ -1.61
CDH12P55289 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH12P55289 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH12P55289 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH12P55289 AL035458.1-201ENST00000433096 585 ntBASIC4.97□□□□□ -1.61
CDH12P55289 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH12P55289 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.97□□□□□ -1.61
CDH12P55289 AC245047.2-201ENST00000441060 530 ntBASIC4.97□□□□□ -1.61
CDH12P55289 EEF1B2P6-201ENST00000445713 673 ntBASIC4.97□□□□□ -1.61
CDH12P55289 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.97□□□□□ -1.61
CDH12P55289 HSPE1P22-201ENST00000456856 327 ntBASIC4.97□□□□□ -1.61
CDH12P55289 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH12P55289 SNORD11.1-201ENST00000459482 85 ntBASIC4.97□□□□□ -1.61
CDH12P55289 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH12P55289 AC021660.1-201ENST00000465006 554 ntBASIC4.97□□□□□ -1.61
CDH12P55289 AC092754.1-201ENST00000472975 479 ntBASIC4.97□□□□□ -1.61
CDH12P55289 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH12P55289 MTCO3P35-201ENST00000485582 781 ntBASIC4.97□□□□□ -1.61
CDH12P55289 RPS24P16-201ENST00000497294 392 ntBASIC4.97□□□□□ -1.61
CDH12P55289 AC113420.1-201ENST00000507903 571 ntBASIC4.97□□□□□ -1.61
CDH12P55289 AC109481.1-201ENST00000509173 282 ntBASIC4.97□□□□□ -1.61
CDH12P55289 AC147055.3-201ENST00000510547 851 ntBASIC4.97□□□□□ -1.61
CDH12P55289 AC093752.1-206ENST00000511823 336 ntBASIC4.97□□□□□ -1.61
CDH12P55289 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH12P55289 AC108120.2-201ENST00000512973 294 ntBASIC4.97□□□□□ -1.61
CDH12P55289 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH12P55289 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CDH12P55289 IGHV3-63-201ENST00000518422 341 ntBASIC4.97□□□□□ -1.61
CDH12P55289 MTND2P38-201ENST00000522536 667 ntBASIC4.97□□□□□ -1.61
CDH12P55289 AC100784.1-201ENST00000522790 310 ntBASIC4.97□□□□□ -1.61
CDH12P55289 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH12P55289 OR10V3P-201ENST00000525712 725 ntBASIC4.97□□□□□ -1.61
CDH12P55289 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH12P55289 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH12P55289 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH12P55289 ZNF971P-201ENST00000562068 1249 ntBASIC4.97□□□□□ -1.61
CDH12P55289 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH12P55289 RBM22P12-201ENST00000567098 1255 ntBASIC4.97□□□□□ -1.61
CDH12P55289 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH12P55289 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH12P55289 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.97□□□□□ -1.61
CDH12P55289 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.97□□□□□ -1.61
CDH12P55289 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH12P55289 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH12P55289 AC008115.3-201ENST00000614874 549 ntBASIC4.97□□□□□ -1.61
CDH12P55289 AP004607.9-201ENST00000618202 316 ntBASIC4.97□□□□□ -1.61
CDH12P55289 AL035461.2-201ENST00000619201 524 ntBASIC4.97□□□□□ -1.61
CDH12P55289 AL158062.1-201ENST00000619632 745 ntBASIC4.97□□□□□ -1.61
CDH12P55289 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH12P55289 AC104985.3-201ENST00000623479 597 ntBASIC4.97□□□□□ -1.61
CDH12P55289 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
CDH12P55289 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
CDH12P55289 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH12P55289 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH12P55289 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CDH12P55289 AC093591.2-201ENST00000565254 3843 ntBASIC4.97□□□□□ -1.61
CDH12P55289 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.97□□□□□ -1.61
CDH12P55289 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.97□□□□□ -1.61
CDH12P55289 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH12P55289 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CDH12P55289 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH12P55289 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDH12P55289 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH12P55289 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.96□□□□□ -1.62
CDH12P55289 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH12P55289 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CDH12P55289 OR13C1P-202ENST00000641378 2919 ntBASIC4.96□□□□□ -1.62
CDH12P55289 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CDH12P55289 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CDH12P55289 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH12P55289 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CDH12P55289 UBE2V1P11-201ENST00000411559 285 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms