Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AL359265.2-201ENST00000434367 631 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 OR52E3P-201ENST00000452083 936 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 RPS17P2-201ENST00000461663 408 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 RN7SL319P-201ENST00000480656 221 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 AC104971.1-201ENST00000495117 578 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 MTND3P3-201ENST00000505004 126 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 AC108157.1-201ENST00000510511 539 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 AC134698.5-201ENST00000519444 336 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.36□□□□□ -1.71
HCFC1P51610 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.36□□□□□ -1.71
HCFC1P51610 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.36□□□□□ -1.71
HCFC1P51610 AC138701.1-201ENST00000524329 714 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HCFC1P51610 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.36□□□□□ -1.71
HCFC1P51610 FAM60CP-201ENST00000591086 664 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.36□□□□□ -1.71
HCFC1P51610 BNIP3P35-201ENST00000604530 490 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 AC011626.1-201ENST00000604710 562 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 AC016542.1-201ENST00000608259 493 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 AL139124.1-201ENST00000609123 421 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 AC119674.1-220ENST00000641502 1048 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HCFC1P51610 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HCFC1P51610 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HCFC1P51610 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HCFC1P51610 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.36□□□□□ -1.71
HCFC1P51610 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HCFC1P51610 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HCFC1P51610 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.36□□□□□ -1.71
HCFC1P51610 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HCFC1P51610 AC073136.1-201ENST00000449426 2884 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 CUL4AP1-201ENST00000514750 1863 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HCFC1P51610 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
HCFC1P51610 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HCFC1P51610 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HCFC1P51610 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HCFC1P51610 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HCFC1P51610 AC092376.2-201ENST00000622621 4116 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 RNA5SP191-201ENST00000362585 102 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 RNA5SP187-201ENST00000384400 119 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 ELOCP19-201ENST00000411919 318 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.36□□□□□ -1.71
HCFC1P51610 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.36□□□□□ -1.71
HCFC1P51610 AC004074.1-201ENST00000421810 1063 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HCFC1P51610 UBE2V1P6-201ENST00000430840 422 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 Z85994.2-201ENST00000434327 452 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 Z99127.2-201ENST00000441426 334 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.36□□□□□ -1.71
HCFC1P51610 GAPDHP14-201ENST00000450472 937 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 OR6C72P-201ENST00000451403 892 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 AL356981.1-201ENST00000454879 684 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 AC006967.1-201ENST00000467608 589 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HCFC1P51610 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.36□□□□□ -1.71
HCFC1P51610 AC112184.1-201ENST00000505179 312 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
HCFC1P51610 AC034205.1-201ENST00000520621 638 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 AC012339.2-201ENST00000523996 453 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.36□□□□□ -1.71
HCFC1P51610 MIR4660-201ENST00000583549 74 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 AC020910.3-201ENST00000603701 874 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 AL671309.1-201ENST00000603750 544 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 AP000240.1-201ENST00000609910 452 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.36□□□□□ -1.71
HCFC1P51610 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.36□□□□□ -1.71
HCFC1P51610 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.36□□□□□ -1.71
HCFC1P51610 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HCFC1P51610 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HCFC1P51610 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HCFC1P51610 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HCFC1P51610 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
HCFC1P51610 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HCFC1P51610 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HCFC1P51610 AL137100.1-201ENST00000556703 1620 ntBASIC4.35□□□□□ -1.71
HCFC1P51610 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HCFC1P51610 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
HCFC1P51610 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.35□□□□□ -1.71
HCFC1P51610 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HCFC1P51610 RNU6-386P-201ENST00000362650 107 ntBASIC4.35□□□□□ -1.71
HCFC1P51610 AL512504.1-201ENST00000415494 778 ntBASIC4.35□□□□□ -1.71
HCFC1P51610 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HCFC1P51610 OR5M12P-201ENST00000423388 929 ntBASIC4.35□□□□□ -1.71
HCFC1P51610 BX842559.2-201ENST00000451418 605 ntBASIC4.35□□□□□ -1.71
HCFC1P51610 OR52A4P-201ENST00000472867 958 ntBASIC4.35□□□□□ -1.71
HCFC1P51610 OR11I1P-201ENST00000486033 954 ntBASIC4.35□□□□□ -1.71
HCFC1P51610 SETP12-201ENST00000514068 805 ntBASIC4.35□□□□□ -1.71
HCFC1P51610 AC027369.5-201ENST00000533838 755 ntBASIC4.35□□□□□ -1.71
HCFC1P51610 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.35□□□□□ -1.71
HCFC1P51610 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.35□□□□□ -1.71
HCFC1P51610 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.35□□□□□ -1.71
HCFC1P51610 AC012414.2-201ENST00000559474 187 ntBASIC4.35□□□□□ -1.71
HCFC1P51610 AC009268.1-201ENST00000561352 1203 ntBASIC4.35□□□□□ -1.71
HCFC1P51610 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
HCFC1P51610 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
HCFC1P51610 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HCFC1P51610 AC010928.1-201ENST00000592477 1447 ntBASIC4.35□□□□□ -1.71
HCFC1P51610 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HCFC1P51610 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms