Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PTPREP23469 MTCYBP4-201ENST00000401524 249 ntBASIC8.4□□□□□ -1.06
PTPREP23469 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC8.4□□□□□ -1.06
PTPREP23469 RPS12P24-201ENST00000412619 387 ntBASIC8.4□□□□□ -1.06
PTPREP23469 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC8.4□□□□□ -1.06
PTPREP23469 TMBIM7P-201ENST00000418074 855 ntBASIC8.4□□□□□ -1.06
PTPREP23469 SRIP2-201ENST00000428470 166 ntBASIC8.4□□□□□ -1.06
PTPREP23469 AC064862.5-201ENST00000440618 334 ntBASIC8.4□□□□□ -1.06
PTPREP23469 AC073415.1-201ENST00000449240 153 ntBASIC8.4□□□□□ -1.06
PTPREP23469 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC8.4□□□□□ -1.06
PTPREP23469 AC079193.1-201ENST00000460497 588 ntBASIC8.4□□□□□ -1.06
PTPREP23469 AC026336.1-201ENST00000466577 351 ntBASIC8.4□□□□□ -1.06
PTPREP23469 VN1R17P-201ENST00000472048 1090 ntBASIC8.4□□□□□ -1.06
PTPREP23469 AC090589.1-201ENST00000473109 362 ntBASIC8.4□□□□□ -1.06
PTPREP23469 RN7SL741P-201ENST00000482473 289 ntBASIC8.4□□□□□ -1.06
PTPREP23469 RN7SL655P-201ENST00000486087 298 ntBASIC8.4□□□□□ -1.06
PTPREP23469 SNRPCP11-201ENST00000492453 205 ntBASIC8.4□□□□□ -1.06
PTPREP23469 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC8.4□□□□□ -1.06
PTPREP23469 GAPDHP56-201ENST00000506031 988 ntBASIC8.4□□□□□ -1.06
PTPREP23469 NRBF2P4-201ENST00000520874 850 ntBASIC8.4□□□□□ -1.06
PTPREP23469 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC8.4□□□□□ -1.06
PTPREP23469 SLC2A13P1-201ENST00000531560 322 ntBASIC8.4□□□□□ -1.06
PTPREP23469 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC8.4□□□□□ -1.06
PTPREP23469 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC8.4□□□□□ -1.06
PTPREP23469 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC8.4□□□□□ -1.06
PTPREP23469 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC8.4□□□□□ -1.06
PTPREP23469 MIR5682-201ENST00000584864 76 ntBASIC8.4□□□□□ -1.06
PTPREP23469 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC8.4□□□□□ -1.06
PTPREP23469 AL359999.1-201ENST00000604513 294 ntBASIC8.4□□□□□ -1.06
PTPREP23469 AC097468.3-201ENST00000607956 456 ntBASIC8.4□□□□□ -1.06
PTPREP23469 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC8.4□□□□□ -1.06
PTPREP23469 RMST_9.1-201ENST00000619945 193 ntBASIC8.4□□□□□ -1.06
PTPREP23469 RPL23AP61-201ENST00000623642 466 ntBASIC8.4□□□□□ -1.06
PTPREP23469 AC079597.1-201ENST00000624306 508 ntBASIC8.4□□□□□ -1.06
PTPREP23469 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PTPREP23469 AC099654.6-201ENST00000636487 512 ntBASIC8.4□□□□□ -1.06
PTPREP23469 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
PTPREP23469 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC8.4□□□□□ -1.06
PTPREP23469 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC8.4□□□□□ -1.07
PTPREP23469 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC8.4□□□□□ -1.07
PTPREP23469 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.07
PTPREP23469 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.07
PTPREP23469 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC8.4□□□□□ -1.07
PTPREP23469 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PTPREP23469 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PTPREP23469 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PTPREP23469 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
PTPREP23469 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC8.4□□□□□ -1.07
PTPREP23469 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC8.4□□□□□ -1.07
PTPREP23469 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
PTPREP23469 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PTPREP23469 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PTPREP23469 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PTPREP23469 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PTPREP23469 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PTPREP23469 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC8.39□□□□□ -1.07
PTPREP23469 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
PTPREP23469 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PTPREP23469 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC8.39□□□□□ -1.07
PTPREP23469 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC8.39□□□□□ -1.07
PTPREP23469 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC8.39□□□□□ -1.07
PTPREP23469 OR1S2-201ENST00000302592 978 ntBASIC8.39□□□□□ -1.07
PTPREP23469 OR11H4-201ENST00000315409 1082 ntBASIC8.39□□□□□ -1.07
PTPREP23469 RPL7P26-201ENST00000333817 754 ntBASIC8.39□□□□□ -1.07
PTPREP23469 FAM32BP-201ENST00000344033 333 ntBASIC8.39□□□□□ -1.07
PTPREP23469 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC8.39□□□□□ -1.07
PTPREP23469 RNU4-20P-201ENST00000365601 151 ntBASIC8.39□□□□□ -1.07
PTPREP23469 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC8.39□□□□□ -1.07
PTPREP23469 SNORA70.8-201ENST00000384231 136 ntBASIC8.39□□□□□ -1.07
PTPREP23469 FGFR1OP2P1-201ENST00000395943 500 ntBASIC8.39□□□□□ -1.07
PTPREP23469 NPM1P38-201ENST00000403835 865 ntBASIC8.39□□□□□ -1.07
PTPREP23469 MAST4-207ENST00000407621 559 ntTSL 2 BASIC8.39□□□□□ -1.07
PTPREP23469 MIR548M-201ENST00000408260 86 ntBASIC8.39□□□□□ -1.07
PTPREP23469 RNU2-18P-201ENST00000411224 162 ntBASIC8.39□□□□□ -1.07
PTPREP23469 AC092745.2-202ENST00000411880 369 ntBASIC8.39□□□□□ -1.07
PTPREP23469 AL354890.1-201ENST00000413730 346 ntBASIC8.39□□□□□ -1.07
PTPREP23469 AL451054.2-201ENST00000420896 202 ntBASIC8.39□□□□□ -1.07
PTPREP23469 NIPA2P1-201ENST00000426223 976 ntBASIC8.39□□□□□ -1.07
PTPREP23469 RPS7P14-201ENST00000426405 583 ntBASIC8.39□□□□□ -1.07
PTPREP23469 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC8.39□□□□□ -1.07
PTPREP23469 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
PTPREP23469 AL049734.2-201ENST00000441066 616 ntBASIC8.39□□□□□ -1.07
PTPREP23469 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC8.39□□□□□ -1.07
PTPREP23469 VN1R6P-201ENST00000458417 907 ntBASIC8.39□□□□□ -1.07
PTPREP23469 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PTPREP23469 AC012181.1-201ENST00000479895 423 ntBASIC8.39□□□□□ -1.07
PTPREP23469 AC021146.1-201ENST00000511202 716 ntBASIC8.39□□□□□ -1.07
PTPREP23469 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC8.39□□□□□ -1.07
PTPREP23469 AC108120.2-201ENST00000512973 294 ntBASIC8.39□□□□□ -1.07
PTPREP23469 RNA5SP518-201ENST00000515957 119 ntBASIC8.39□□□□□ -1.07
PTPREP23469 AP001803.1-201ENST00000525668 147 ntBASIC8.39□□□□□ -1.07
PTPREP23469 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC8.39□□□□□ -1.07
PTPREP23469 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC8.39□□□□□ -1.07
PTPREP23469 AC025260.1-201ENST00000548858 430 ntBASIC8.39□□□□□ -1.07
PTPREP23469 CYCSP2-201ENST00000558168 301 ntBASIC8.39□□□□□ -1.07
PTPREP23469 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
PTPREP23469 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC8.39□□□□□ -1.07
PTPREP23469 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC8.39□□□□□ -1.07
PTPREP23469 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC8.39□□□□□ -1.07
PTPREP23469 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms