Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
PDGFRAP16234 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.3□□□□□ -1.56
PDGFRAP16234 AL359219.2-201ENST00000555184 348 ntBASIC5.3□□□□□ -1.56
PDGFRAP16234 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.3□□□□□ -1.56
PDGFRAP16234 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.3□□□□□ -1.56
PDGFRAP16234 MIR4443-201ENST00000585052 53 ntBASIC5.3□□□□□ -1.56
PDGFRAP16234 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.3□□□□□ -1.56
PDGFRAP16234 AP000648.2-201ENST00000624182 404 ntBASIC5.3□□□□□ -1.56
PDGFRAP16234 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.3□□□□□ -1.56
PDGFRAP16234 AC073136.1-201ENST00000449426 2884 ntBASIC5.3□□□□□ -1.56
PDGFRAP16234 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
PDGFRAP16234 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PDGFRAP16234 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDGFRAP16234 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PDGFRAP16234 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFRAP16234 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFRAP16234 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.29□□□□□ -1.56
PDGFRAP16234 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PDGFRAP16234 HSPA8P18-201ENST00000439846 1928 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 SNURFL-201ENST00000309296 343 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 RNA5SP305-201ENST00000362665 119 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 RNU4-4P-201ENST00000364588 130 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PDGFRAP16234 SNORA11B-201ENST00000408175 129 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.29□□□□□ -1.56
PDGFRAP16234 HSPE1P16-201ENST00000426640 348 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 RPL23AP4-201ENST00000427757 463 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.29□□□□□ -1.56
PDGFRAP16234 AL450263.2-201ENST00000439400 589 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 TXNP5-201ENST00000441043 315 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 AC092647.3-201ENST00000443044 633 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 RN7SL610P-201ENST00000463845 291 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.29□□□□□ -1.56
PDGFRAP16234 HMGN2P25-201ENST00000486956 268 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 ENPP7P11-201ENST00000505915 627 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 HMGB1P47-201ENST00000511281 589 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 AC004980.4-201ENST00000513375 203 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 RN7SKP147-201ENST00000517154 244 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 AC013701.1-201ENST00000522657 465 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.29□□□□□ -1.56
PDGFRAP16234 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.29□□□□□ -1.56
PDGFRAP16234 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.29□□□□□ -1.56
PDGFRAP16234 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.29□□□□□ -1.56
PDGFRAP16234 AC105254.2-201ENST00000603636 436 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 AC034236.3-201ENST00000605999 461 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.29□□□□□ -1.56
PDGFRAP16234 AC068870.2-201ENST00000620635 389 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 AP002799.1-201ENST00000623552 423 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 CASC19-222ENST00000641321 1173 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFRAP16234 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
PDGFRAP16234 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFRAP16234 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFRAP16234 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.29□□□□□ -1.56
PDGFRAP16234 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PDGFRAP16234 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFRAP16234 AC007342.7-201ENST00000624610 2337 ntBASIC5.29□□□□□ -1.56
PDGFRAP16234 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PDGFRAP16234 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFRAP16234 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PDGFRAP16234 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFRAP16234 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFRAP16234 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFRAP16234 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFRAP16234 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFRAP16234 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PDGFRAP16234 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFRAP16234 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PDGFRAP16234 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.28□□□□□ -1.56
PDGFRAP16234 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.28□□□□□ -1.56
PDGFRAP16234 GSTA12P-201ENST00000402398 508 ntBASIC5.28□□□□□ -1.56
PDGFRAP16234 SNORA77-201ENST00000408716 125 ntBASIC5.28□□□□□ -1.56
PDGFRAP16234 SETP15-201ENST00000412724 337 ntBASIC5.28□□□□□ -1.56
PDGFRAP16234 AC013429.2-201ENST00000418798 781 ntBASIC5.28□□□□□ -1.56
PDGFRAP16234 DDX39BP1-205ENST00000422507 192 ntBASIC5.28□□□□□ -1.56
PDGFRAP16234 CR848007.2-201ENST00000424918 787 ntBASIC5.28□□□□□ -1.56
PDGFRAP16234 AC006455.6-201ENST00000426192 893 ntBASIC5.28□□□□□ -1.56
PDGFRAP16234 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.28□□□□□ -1.56
PDGFRAP16234 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.28□□□□□ -1.56
PDGFRAP16234 PA2G4P6-201ENST00000438325 1197 ntBASIC5.28□□□□□ -1.56
PDGFRAP16234 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.28□□□□□ -1.56
PDGFRAP16234 AL627224.1-201ENST00000448334 444 ntBASIC5.28□□□□□ -1.56
PDGFRAP16234 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.28□□□□□ -1.56
PDGFRAP16234 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFRAP16234 RN7SL329P-201ENST00000467740 299 ntBASIC5.28□□□□□ -1.56
PDGFRAP16234 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.28□□□□□ -1.56
PDGFRAP16234 RN7SL826P-201ENST00000479724 288 ntBASIC5.28□□□□□ -1.56
PDGFRAP16234 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.28□□□□□ -1.56
PDGFRAP16234 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.28□□□□□ -1.56
PDGFRAP16234 AC110775.1-201ENST00000513721 462 ntBASIC5.28□□□□□ -1.56
PDGFRAP16234 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.28□□□□□ -1.56
PDGFRAP16234 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PDGFRAP16234 AL512310.9-201ENST00000553311 948 ntBASIC5.28□□□□□ -1.56
PDGFRAP16234 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFRAP16234 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDGFRAP16234 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.28□□□□□ -1.56
PDGFRAP16234 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms