Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HLA-DOAP06340 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.15□□□□□ -1.42
HLA-DOAP06340 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HLA-DOAP06340 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HLA-DOAP06340 AL355488.2-201ENST00000609909 2850 ntBASIC6.15□□□□□ -1.42
HLA-DOAP06340 AL034549.2-201ENST00000618285 3373 ntBASIC6.15□□□□□ -1.42
HLA-DOAP06340 RNA5SP123-201ENST00000363244 119 ntBASIC6.15□□□□□ -1.42
HLA-DOAP06340 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.15□□□□□ -1.42
HLA-DOAP06340 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HLA-DOAP06340 GJA6P-201ENST00000415117 1042 ntBASIC6.15□□□□□ -1.42
HLA-DOAP06340 RBMY2KP-201ENST00000418221 992 ntBASIC6.15□□□□□ -1.42
HLA-DOAP06340 MTCYBP7-201ENST00000419540 1134 ntBASIC6.15□□□□□ -1.42
HLA-DOAP06340 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DOAP06340 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HLA-DOAP06340 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DOAP06340 AL445669.2-201ENST00000454425 421 ntBASIC6.15□□□□□ -1.42
HLA-DOAP06340 AC104629.2-201ENST00000468627 598 ntBASIC6.15□□□□□ -1.42
HLA-DOAP06340 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DOAP06340 MTCO3P35-201ENST00000485582 781 ntBASIC6.15□□□□□ -1.42
HLA-DOAP06340 RPL7P41-201ENST00000485823 957 ntBASIC6.15□□□□□ -1.42
HLA-DOAP06340 HMGN2P25-201ENST00000486956 268 ntBASIC6.15□□□□□ -1.42
HLA-DOAP06340 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.15□□□□□ -1.42
HLA-DOAP06340 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.15□□□□□ -1.42
HLA-DOAP06340 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.15□□□□□ -1.42
HLA-DOAP06340 AC067904.2-201ENST00000517322 1283 ntBASIC6.15□□□□□ -1.42
HLA-DOAP06340 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DOAP06340 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DOAP06340 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.15□□□□□ -1.42
HLA-DOAP06340 NOP56P3-201ENST00000549457 385 ntBASIC6.15□□□□□ -1.42
HLA-DOAP06340 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DOAP06340 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DOAP06340 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DOAP06340 MRPS21P9-201ENST00000571150 257 ntBASIC6.15□□□□□ -1.42
HLA-DOAP06340 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-DOAP06340 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HLA-DOAP06340 MIR7853-201ENST00000584820 132 ntBASIC6.15□□□□□ -1.42
HLA-DOAP06340 AL365400.2-201ENST00000605604 902 ntBASIC6.15□□□□□ -1.42
HLA-DOAP06340 RNU4-5P-201ENST00000607255 135 ntBASIC6.15□□□□□ -1.42
HLA-DOAP06340 AC245008.1-201ENST00000608123 476 ntBASIC6.15□□□□□ -1.42
HLA-DOAP06340 AC093388.1-201ENST00000609166 430 ntBASIC6.15□□□□□ -1.42
HLA-DOAP06340 AC124016.2-201ENST00000610058 665 ntBASIC6.15□□□□□ -1.42
HLA-DOAP06340 AL136295.6-201ENST00000610486 658 ntBASIC6.15□□□□□ -1.42
HLA-DOAP06340 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC6.15□□□□□ -1.42
HLA-DOAP06340 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
HLA-DOAP06340 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
HLA-DOAP06340 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HLA-DOAP06340 AC005261.6-201ENST00000623072 1387 ntBASIC6.15□□□□□ -1.43
HLA-DOAP06340 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.15□□□□□ -1.43
HLA-DOAP06340 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.15□□□□□ -1.43
HLA-DOAP06340 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HLA-DOAP06340 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
HLA-DOAP06340 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
HLA-DOAP06340 INTS6P1-201ENST00000504674 2530 ntBASIC6.15□□□□□ -1.43
HLA-DOAP06340 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DOAP06340 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DOAP06340 AL132656.3-201ENST00000606384 1595 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DOAP06340 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DOAP06340 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DOAP06340 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HLA-DOAP06340 OR9G4-201ENST00000302957 984 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 RN7SKP104-201ENST00000362605 328 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 RNU6-298P-201ENST00000390888 96 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DOAP06340 NANOGP5-201ENST00000424456 877 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 VN1R108P-201ENST00000431580 830 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 AC138761.5-201ENST00000433967 325 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.14□□□□□ -1.43
HLA-DOAP06340 AC006466.1-201ENST00000438721 289 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 AC073648.4-201ENST00000442655 781 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 RNFT1P2-201ENST00000443064 757 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 AC091685.2-201ENST00000454924 864 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DOAP06340 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DOAP06340 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.14□□□□□ -1.43
HLA-DOAP06340 AP000563.1-201ENST00000490865 758 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 AC090058.1-201ENST00000498788 435 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 MTND4LP2-201ENST00000502312 285 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 AC121161.1-201ENST00000510606 652 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DOAP06340 RNA5SP116-201ENST00000516132 98 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 OR5AZ1P-201ENST00000527448 943 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
HLA-DOAP06340 AC087894.1-201ENST00000538359 518 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
HLA-DOAP06340 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DOAP06340 OR4U1P-201ENST00000554958 912 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DOAP06340 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DOAP06340 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.14□□□□□ -1.43
HLA-DOAP06340 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.14□□□□□ -1.43
HLA-DOAP06340 AC145350.1-201ENST00000567426 208 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 MIR3934-201ENST00000579806 107 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DOAP06340 AC011487.3-201ENST00000593607 453 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 AL358072.1-201ENST00000604156 575 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 Z94722.1-201ENST00000604328 474 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 AC005084.1-201ENST00000605160 304 ntBASIC6.14□□□□□ -1.43
HLA-DOAP06340 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.14□□□□□ -1.43
HLA-DOAP06340 AC008759.3-201ENST00000613300 508 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms