Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.82□□□□□ -1.64
ZIC3O60481 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.82□□□□□ -1.64
ZIC3O60481 OR2BH1P-201ENST00000608850 864 ntBASIC4.82□□□□□ -1.64
ZIC3O60481 AL157392.4-201ENST00000609756 345 ntBASIC4.82□□□□□ -1.64
ZIC3O60481 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.82□□□□□ -1.64
ZIC3O60481 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.82□□□□□ -1.64
ZIC3O60481 AC022079.2-201ENST00000619739 566 ntBASIC4.82□□□□□ -1.64
ZIC3O60481 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.82□□□□□ -1.64
ZIC3O60481 AC097655.1-201ENST00000635075 318 ntBASIC4.82□□□□□ -1.64
ZIC3O60481 OR6C71P-202ENST00000641886 1107 ntBASIC4.82□□□□□ -1.64
ZIC3O60481 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZIC3O60481 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
ZIC3O60481 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
ZIC3O60481 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.82□□□□□ -1.64
ZIC3O60481 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZIC3O60481 AC011493.1-201ENST00000596753 1632 ntBASIC4.82□□□□□ -1.64
ZIC3O60481 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.82□□□□□ -1.64
ZIC3O60481 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ZIC3O60481 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
ZIC3O60481 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ZIC3O60481 AL590763.1-201ENST00000398297 1545 ntBASIC4.82□□□□□ -1.64
ZIC3O60481 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
ZIC3O60481 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZIC3O60481 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZIC3O60481 AC016745.2-201ENST00000608834 3443 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 NLRP3P1-201ENST00000622303 1785 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 AC133552.1-201ENST00000569988 4007 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZIC3O60481 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.81□□□□□ -1.64
ZIC3O60481 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ZIC3O60481 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ZIC3O60481 RNU5B-1-201ENST00000363286 116 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZIC3O60481 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
ZIC3O60481 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.81□□□□□ -1.64
ZIC3O60481 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ZIC3O60481 AL139148.1-201ENST00000427122 680 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 MGAT2P2-201ENST00000427194 797 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 ETF1P3-201ENST00000430422 1160 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 MTND2P5-201ENST00000432656 1006 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.81□□□□□ -1.64
ZIC3O60481 AL358794.1-201ENST00000445689 381 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 REG1CP-206ENST00000447469 496 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.81□□□□□ -1.64
ZIC3O60481 AC020898.1-201ENST00000474167 787 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 RN7SL727P-201ENST00000482164 296 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 CR383656.1-201ENST00000484916 377 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 IGBP1P4-201ENST00000503202 879 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.81□□□□□ -1.64
ZIC3O60481 AC147055.3-201ENST00000510547 851 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 HMGN1P9-201ENST00000515212 298 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.81□□□□□ -1.64
ZIC3O60481 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.81□□□□□ -1.64
ZIC3O60481 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.81□□□□□ -1.64
ZIC3O60481 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.81□□□□□ -1.64
ZIC3O60481 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.81□□□□□ -1.64
ZIC3O60481 MIR4789-201ENST00000577469 82 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 MIR7853-201ENST00000584820 132 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.81□□□□□ -1.64
ZIC3O60481 AC068313.1-201ENST00000604028 1008 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 AL162431.4-201ENST00000604674 411 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
ZIC3O60481 AL356274.1-201ENST00000617064 410 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 RNA5SP439-201ENST00000617595 124 ntBASIC4.81□□□□□ -1.64
ZIC3O60481 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.81□□□□□ -1.64
ZIC3O60481 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
ZIC3O60481 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
ZIC3O60481 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ZIC3O60481 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.81□□□□□ -1.64
ZIC3O60481 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZIC3O60481 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZIC3O60481 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZIC3O60481 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
ZIC3O60481 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
ZIC3O60481 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
ZIC3O60481 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ZIC3O60481 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
ZIC3O60481 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.8□□□□□ -1.64
ZIC3O60481 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
ZIC3O60481 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ZIC3O60481 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.8□□□□□ -1.64
ZIC3O60481 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZIC3O60481 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZIC3O60481 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZIC3O60481 ZNF849P-201ENST00000594711 1566 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ZIC3O60481 U3.7-201ENST00000363668 216 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 RNU1-146P-201ENST00000364015 165 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 RNU1-43P-201ENST00000365052 165 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 AC007618.1-201ENST00000366455 732 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 RNU4-31P-201ENST00000384211 141 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
ZIC3O60481 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.8□□□□□ -1.64
ZIC3O60481 RPL5P19-201ENST00000404228 893 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.8□□□□□ -1.64
ZIC3O60481 MTCO3P4-201ENST00000419236 787 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.8□□□□□ -1.64
ZIC3O60481 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.8□□□□□ -1.64
ZIC3O60481 USP9YP21-201ENST00000420603 432 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms