Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SDCBPO00560 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.98□□□□□ -1.77
SDCBPO00560 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SDCBPO00560 AL121950.1-201ENST00000624993 2077 ntBASIC3.98□□□□□ -1.77
SDCBPO00560 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC3.98□□□□□ -1.77
SDCBPO00560 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
SDCBPO00560 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SDCBPO00560 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.98□□□□□ -1.77
SDCBPO00560 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SDCBPO00560 HDGFP1-201ENST00000405943 252 ntBASIC3.98□□□□□ -1.77
SDCBPO00560 RNU4-34P-201ENST00000410431 124 ntBASIC3.98□□□□□ -1.77
SDCBPO00560 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SDCBPO00560 CEACAMP8-201ENST00000413902 580 ntBASIC3.98□□□□□ -1.77
SDCBPO00560 GTF2IP5-201ENST00000414608 731 ntBASIC3.98□□□□□ -1.77
SDCBPO00560 AL358176.3-201ENST00000420757 454 ntBASIC3.98□□□□□ -1.77
SDCBPO00560 RPL7P57-201ENST00000423238 740 ntBASIC3.98□□□□□ -1.77
SDCBPO00560 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.98□□□□□ -1.77
SDCBPO00560 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC3.98□□□□□ -1.77
SDCBPO00560 CEACAMP7-201ENST00000444105 496 ntBASIC3.98□□□□□ -1.77
SDCBPO00560 AC104651.2-201ENST00000447549 528 ntBASIC3.98□□□□□ -1.77
SDCBPO00560 AC234781.3-201ENST00000452540 973 ntBASIC3.98□□□□□ -1.77
SDCBPO00560 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.98□□□□□ -1.77
SDCBPO00560 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.98□□□□□ -1.77
SDCBPO00560 RPL21P6-201ENST00000479171 504 ntBASIC3.98□□□□□ -1.77
SDCBPO00560 RN7SL817P-201ENST00000480777 288 ntBASIC3.98□□□□□ -1.77
SDCBPO00560 RPL37AP8-201ENST00000494116 276 ntBASIC3.98□□□□□ -1.77
SDCBPO00560 MRPS33P2-201ENST00000507850 322 ntBASIC3.98□□□□□ -1.77
SDCBPO00560 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.98□□□□□ -1.77
SDCBPO00560 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.98□□□□□ -1.77
SDCBPO00560 RNA5SP392-201ENST00000516905 112 ntBASIC3.98□□□□□ -1.77
SDCBPO00560 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC3.98□□□□□ -1.77
SDCBPO00560 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.98□□□□□ -1.77
SDCBPO00560 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.98□□□□□ -1.77
SDCBPO00560 AC015912.2-201ENST00000571053 181 ntBASIC3.98□□□□□ -1.77
SDCBPO00560 AC209154.1-201ENST00000582156 337 ntBASIC3.98□□□□□ -1.77
SDCBPO00560 AL121932.1-201ENST00000605542 214 ntBASIC3.98□□□□□ -1.77
SDCBPO00560 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC3.98□□□□□ -1.77
SDCBPO00560 AC091905.4-201ENST00000623432 202 ntBASIC3.98□□□□□ -1.77
SDCBPO00560 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC3.98□□□□□ -1.77
SDCBPO00560 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.98□□□□□ -1.77
SDCBPO00560 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC3.98□□□□□ -1.77
SDCBPO00560 AP001002.1-201ENST00000625148 1513 ntBASIC3.98□□□□□ -1.77
SDCBPO00560 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SDCBPO00560 BTBD10P1-201ENST00000549824 1352 ntBASIC3.98□□□□□ -1.77
SDCBPO00560 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SDCBPO00560 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.98□□□□□ -1.77
SDCBPO00560 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
SDCBPO00560 TLK1P1-201ENST00000456760 2440 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 XKRY2-202ENST00000623874 1581 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 XKRY-202ENST00000624960 1581 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 IRF5P1-201ENST00000504852 2164 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 CIR1P2-201ENST00000514821 1342 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.97□□□□□ -1.77
SDCBPO00560 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.97□□□□□ -1.77
SDCBPO00560 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.97□□□□□ -1.77
SDCBPO00560 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
SDCBPO00560 OR51C1P-202ENST00000641159 1444 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SDCBPO00560 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SDCBPO00560 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SDCBPO00560 OR56B2P-201ENST00000317102 954 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 RNA5SP372-201ENST00000390836 115 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SDCBPO00560 CHEK2P3-201ENST00000416118 248 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 Z74021.1-201ENST00000423610 407 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 AC093414.1-201ENST00000434712 514 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 RPL7P11-201ENST00000437586 658 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.97□□□□□ -1.77
SDCBPO00560 AC112498.1-201ENST00000444401 332 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.97□□□□□ -1.77
SDCBPO00560 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.97□□□□□ -1.77
SDCBPO00560 OR2AF1P-201ENST00000454899 889 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 AC135999.1-201ENST00000478962 479 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 RN7SL727P-201ENST00000482164 296 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 AC093890.1-201ENST00000502554 540 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC3.97□□□□□ -1.77
SDCBPO00560 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.97□□□□□ -1.77
SDCBPO00560 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.97□□□□□ -1.77
SDCBPO00560 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC3.97□□□□□ -1.77
SDCBPO00560 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC3.97□□□□□ -1.77
SDCBPO00560 CYCSP28-201ENST00000534284 321 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 HMGN2P6-201ENST00000551091 273 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.97□□□□□ -1.77
SDCBPO00560 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.97□□□□□ -1.77
SDCBPO00560 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC3.97□□□□□ -1.77
SDCBPO00560 AL512624.1-201ENST00000613638 469 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SDCBPO00560 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
SDCBPO00560 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SDCBPO00560 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SDCBPO00560 A2MP1-204ENST00000566278 4130 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 AL355852.1-201ENST00000454081 1771 ntBASIC3.97□□□□□ -1.77
SDCBPO00560 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SDCBPO00560 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC3.96□□□□□ -1.77
SDCBPO00560 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
SDCBPO00560 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.77
SDCBPO00560 CASC19-204ENST00000641001 2055 ntBASIC3.96□□□□□ -1.77
SDCBPO00560 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.96□□□□□ -1.78
SDCBPO00560 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms